Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH8P55286 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH8P55286 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH8P55286 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.52■□□□□ 0.4
CDH8P55286 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.52■□□□□ 0.4
CDH8P55286 RBPMS2P1-201ENST00000437762 623 ntBASIC17.52■□□□□ 0.4
CDH8P55286 AC109322.1-201ENST00000524499 1264 ntBASIC17.52■□□□□ 0.4
CDH8P55286 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.52■□□□□ 0.4
CDH8P55286 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.52■□□□□ 0.4
CDH8P55286 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.52■□□□□ 0.4
CDH8P55286 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.52■□□□□ 0.4
CDH8P55286 AC009093.7-201ENST00000623853 1223 ntBASIC17.52■□□□□ 0.4
CDH8P55286 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
CDH8P55286 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH8P55286 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.52■□□□□ 0.39
CDH8P55286 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
CDH8P55286 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CDH8P55286 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH8P55286 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH8P55286 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH8P55286 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDH8P55286 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDH8P55286 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDH8P55286 AL589702.1-201ENST00000641229 1509 ntBASIC17.52■□□□□ 0.39
CDH8P55286 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CDH8P55286 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH8P55286 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH8P55286 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH8P55286 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH8P55286 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH8P55286 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH8P55286 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CDH8P55286 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH8P55286 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH8P55286 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH8P55286 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH8P55286 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CDH8P55286 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH8P55286 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CDH8P55286 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH8P55286 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH8P55286 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.51■□□□□ 0.39
CDH8P55286 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH8P55286 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH8P55286 POU5F1P6-201ENST00000466990 990 ntBASIC17.51■□□□□ 0.39
CDH8P55286 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH8P55286 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.51■□□□□ 0.39
CDH8P55286 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH8P55286 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CDH8P55286 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CDH8P55286 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CDH8P55286 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.51■□□□□ 0.39
CDH8P55286 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH8P55286 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH8P55286 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH8P55286 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH8P55286 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDH8P55286 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH8P55286 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CDH8P55286 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH8P55286 KRT18P28-201ENST00000453838 1332 ntBASIC17.5■□□□□ 0.39
CDH8P55286 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH8P55286 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH8P55286 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH8P55286 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH8P55286 AP3S2-216ENST00000617003 1561 ntBASIC17.5■□□□□ 0.39
CDH8P55286 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH8P55286 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH8P55286 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
CDH8P55286 AC124067.4-201ENST00000519691 2379 ntBASIC17.5■□□□□ 0.39
CDH8P55286 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH8P55286 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH8P55286 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH8P55286 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH8P55286 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH8P55286 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH8P55286 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH8P55286 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH8P55286 TSEN15P1-201ENST00000423257 515 ntBASIC17.5■□□□□ 0.39
CDH8P55286 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDH8P55286 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH8P55286 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH8P55286 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH8P55286 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH8P55286 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.5■□□□□ 0.39
CDH8P55286 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH8P55286 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.5■□□□□ 0.39
CDH8P55286 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH8P55286 AC006449.5-201ENST00000610658 2098 ntBASIC17.5■□□□□ 0.39
CDH8P55286 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH8P55286 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH8P55286 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH8P55286 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CDH8P55286 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH8P55286 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH8P55286 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH8P55286 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH8P55286 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CDH8P55286 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH8P55286 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms