Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEX1O43933 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.13■□□□□ 0.17
PEX1O43933 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
PEX1O43933 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.13■□□□□ 0.17
PEX1O43933 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PEX1O43933 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PEX1O43933 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.12■□□□□ 0.17
PEX1O43933 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PEX1O43933 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.12■□□□□ 0.17
PEX1O43933 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PEX1O43933 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 TNRC18P2-201ENST00000417666 2714 ntBASIC16.12■□□□□ 0.17
PEX1O43933 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.12■□□□□ 0.17
PEX1O43933 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PEX1O43933 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.12■□□□□ 0.17
PEX1O43933 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.12■□□□□ 0.17
PEX1O43933 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.12■□□□□ 0.17
PEX1O43933 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.12■□□□□ 0.17
PEX1O43933 RPS2P1-201ENST00000434010 821 ntBASIC16.12■□□□□ 0.17
PEX1O43933 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.12■□□□□ 0.17
PEX1O43933 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PEX1O43933 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.12■□□□□ 0.17
PEX1O43933 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.12■□□□□ 0.17
PEX1O43933 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.12■□□□□ 0.17
PEX1O43933 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.12■□□□□ 0.17
PEX1O43933 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
PEX1O43933 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 MIR7706-201ENST00000613747 67 ntBASIC16.12■□□□□ 0.17
PEX1O43933 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.12■□□□□ 0.17
PEX1O43933 AF228730.7-201ENST00000641842 219 ntBASIC16.12■□□□□ 0.17
PEX1O43933 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.12■□□□□ 0.17
PEX1O43933 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 EGFEM1P-202ENST00000431685 1563 ntBASIC16.12■□□□□ 0.17
PEX1O43933 PMPCAP1-201ENST00000508114 1576 ntBASIC16.12■□□□□ 0.17
PEX1O43933 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.12■□□□□ 0.17
PEX1O43933 AC243591.1-201ENST00000452967 1364 ntBASIC16.12■□□□□ 0.17
PEX1O43933 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PEX1O43933 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX1O43933 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.11■□□□□ 0.17
PEX1O43933 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PEX1O43933 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.11■□□□□ 0.17
PEX1O43933 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PEX1O43933 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX1O43933 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX1O43933 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX1O43933 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX1O43933 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX1O43933 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
PEX1O43933 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX1O43933 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PEX1O43933 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.11■□□□□ 0.17
PEX1O43933 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX1O43933 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PEX1O43933 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.11■□□□□ 0.17
PEX1O43933 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX1O43933 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.11■□□□□ 0.17
PEX1O43933 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PEX1O43933 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PEX1O43933 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.11■□□□□ 0.17
PEX1O43933 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.11■□□□□ 0.17
PEX1O43933 OR7E14P-202ENST00000530490 1290 ntBASIC16.11■□□□□ 0.17
PEX1O43933 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.11■□□□□ 0.17
PEX1O43933 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.11■□□□□ 0.17
PEX1O43933 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PEX1O43933 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.11■□□□□ 0.17
PEX1O43933 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.11■□□□□ 0.17
PEX1O43933 MTDHP4-201ENST00000600287 670 ntBASIC16.11■□□□□ 0.17
PEX1O43933 AD001527.2-201ENST00000622994 785 ntBASIC16.11■□□□□ 0.17
PEX1O43933 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX1O43933 NORAD-201ENST00000565493 5339 ntBASIC16.11■□□□□ 0.17
PEX1O43933 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.11■□□□□ 0.17
PEX1O43933 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX1O43933 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX1O43933 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX1O43933 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.11■□□□□ 0.17
PEX1O43933 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PEX1O43933 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.11■□□□□ 0.17
PEX1O43933 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.11■□□□□ 0.17
PEX1O43933 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.11■□□□□ 0.17
PEX1O43933 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.11■□□□□ 0.17
PEX1O43933 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms