Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LOC102724428A0A0B4J2F2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LOC102724428A0A0B4J2F2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LOC102724428A0A0B4J2F2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LOC102724428A0A0B4J2F2 TUBB1P2-201ENST00000422712 1306 ntBASIC20.65■□□□□ 0.9
LOC102724428A0A0B4J2F2 TUBB1P1-201ENST00000503144 1300 ntBASIC20.65■□□□□ 0.9
LOC102724428A0A0B4J2F2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC20.65■□□□□ 0.9
LOC102724428A0A0B4J2F2 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC20.65■□□□□ 0.9
LOC102724428A0A0B4J2F2 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LOC102724428A0A0B4J2F2 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.65■□□□□ 0.9
LOC102724428A0A0B4J2F2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC20.65■□□□□ 0.9
LOC102724428A0A0B4J2F2 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
LOC102724428A0A0B4J2F2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.65■□□□□ 0.9
LOC102724428A0A0B4J2F2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC20.65■□□□□ 0.9
LOC102724428A0A0B4J2F2 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.65■□□□□ 0.9
LOC102724428A0A0B4J2F2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LOC102724428A0A0B4J2F2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.65■□□□□ 0.9
LOC102724428A0A0B4J2F2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LOC102724428A0A0B4J2F2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.64■□□□□ 0.9
LOC102724428A0A0B4J2F2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LOC102724428A0A0B4J2F2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
LOC102724428A0A0B4J2F2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
LOC102724428A0A0B4J2F2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC20.64■□□□□ 0.89
LOC102724428A0A0B4J2F2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LOC102724428A0A0B4J2F2 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LOC102724428A0A0B4J2F2 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.64■□□□□ 0.89
LOC102724428A0A0B4J2F2 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
LOC102724428A0A0B4J2F2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LOC102724428A0A0B4J2F2 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
LOC102724428A0A0B4J2F2 NME6-203ENST00000415644 849 ntTSL 2 BASIC20.64■□□□□ 0.89
LOC102724428A0A0B4J2F2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC20.64■□□□□ 0.89
LOC102724428A0A0B4J2F2 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
LOC102724428A0A0B4J2F2 TDH-203ENST00000531764 1110 ntBASIC20.64■□□□□ 0.89
LOC102724428A0A0B4J2F2 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC20.64■□□□□ 0.89
LOC102724428A0A0B4J2F2 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC20.64■□□□□ 0.89
LOC102724428A0A0B4J2F2 AL022328.1-201ENST00000610050 478 ntBASIC20.64■□□□□ 0.89
LOC102724428A0A0B4J2F2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC20.64■□□□□ 0.89
LOC102724428A0A0B4J2F2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
LOC102724428A0A0B4J2F2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LOC102724428A0A0B4J2F2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
LOC102724428A0A0B4J2F2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 USB1-202ENST00000423271 1217 ntTSL 2 BASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 AL355994.2-201ENST00000447882 704 ntBASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 CSF2RBP1-201ENST00000447905 391 ntBASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 AL359711.2-201ENST00000563105 872 ntBASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 AC060834.1-201ENST00000443027 2032 ntBASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC20.63■□□□□ 0.89
LOC102724428A0A0B4J2F2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 LINC01144-201ENST00000626198 1710 ntBASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 AZGP1P1-201ENST00000411909 902 ntBASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 RNA5SP412-201ENST00000516234 123 ntBASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 CD74-212ENST00000524315 584 ntTSL 5 BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 BRI3BPP1-201ENST00000594224 787 ntBASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 NOC2LP2-201ENST00000407594 1944 ntBASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 BCL2-203ENST00000589955 5011 ntBASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 AC141586.5-201ENST00000624546 2050 ntBASIC20.62■□□□□ 0.89
LOC102724428A0A0B4J2F2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms