Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
SYNE2Q8WXH0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC10.02□□□□□ -0.81
SYNE2Q8WXH0 KRT18P24-201ENST00000344739 1156 ntBASIC10.01□□□□□ -0.81
SYNE2Q8WXH0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC10.01□□□□□ -0.81
SYNE2Q8WXH0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC10.01□□□□□ -0.81
SYNE2Q8WXH0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SYNE2Q8WXH0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
SYNE2Q8WXH0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC10.01□□□□□ -0.81
SYNE2Q8WXH0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SYNE2Q8WXH0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC10.01□□□□□ -0.81
SYNE2Q8WXH0 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SYNE2Q8WXH0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SYNE2Q8WXH0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
SYNE2Q8WXH0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
SYNE2Q8WXH0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC10.01□□□□□ -0.81
SYNE2Q8WXH0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC10.01□□□□□ -0.81
SYNE2Q8WXH0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC10.01□□□□□ -0.81
SYNE2Q8WXH0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC10□□□□□ -0.81
SYNE2Q8WXH0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC10□□□□□ -0.81
SYNE2Q8WXH0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
SYNE2Q8WXH0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SYNE2Q8WXH0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC10□□□□□ -0.81
SYNE2Q8WXH0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC10□□□□□ -0.81
SYNE2Q8WXH0 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC10□□□□□ -0.81
SYNE2Q8WXH0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SYNE2Q8WXH0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
SYNE2Q8WXH0 MIR4651-201ENST00000582622 73 ntBASIC10□□□□□ -0.81
SYNE2Q8WXH0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC10□□□□□ -0.81
SYNE2Q8WXH0 AL109923.1-201ENST00000618799 583 ntBASIC10□□□□□ -0.81
SYNE2Q8WXH0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SYNE2Q8WXH0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC9.99□□□□□ -0.81
SYNE2Q8WXH0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC9.99□□□□□ -0.81
SYNE2Q8WXH0 SRD5A1P1-201ENST00000442297 786 ntBASIC9.99□□□□□ -0.81
SYNE2Q8WXH0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
SYNE2Q8WXH0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC9.99□□□□□ -0.81
SYNE2Q8WXH0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC9.99□□□□□ -0.81
SYNE2Q8WXH0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
SYNE2Q8WXH0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC9.99□□□□□ -0.81
SYNE2Q8WXH0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC9.99□□□□□ -0.81
SYNE2Q8WXH0 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
SYNE2Q8WXH0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
SYNE2Q8WXH0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC9.99□□□□□ -0.81
SYNE2Q8WXH0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC9.99□□□□□ -0.81
SYNE2Q8WXH0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC9.99□□□□□ -0.81
SYNE2Q8WXH0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SYNE2Q8WXH0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SYNE2Q8WXH0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC9.98□□□□□ -0.81
SYNE2Q8WXH0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SYNE2Q8WXH0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SYNE2Q8WXH0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC9.98□□□□□ -0.81
SYNE2Q8WXH0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
SYNE2Q8WXH0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SYNE2Q8WXH0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC9.98□□□□□ -0.81
SYNE2Q8WXH0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC9.98□□□□□ -0.81
SYNE2Q8WXH0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SYNE2Q8WXH0 SYT6-210ENST00000641643 1587 ntBASIC9.98□□□□□ -0.81
SYNE2Q8WXH0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SYNE2Q8WXH0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC9.98□□□□□ -0.81
SYNE2Q8WXH0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC9.98□□□□□ -0.81
SYNE2Q8WXH0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SYNE2Q8WXH0 RPS2P7-201ENST00000447334 885 ntBASIC9.98□□□□□ -0.81
SYNE2Q8WXH0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC9.98□□□□□ -0.81
SYNE2Q8WXH0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
SYNE2Q8WXH0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC9.97□□□□□ -0.81
SYNE2Q8WXH0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC9.97□□□□□ -0.81
SYNE2Q8WXH0 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC9.97□□□□□ -0.81
SYNE2Q8WXH0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SYNE2Q8WXH0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC9.97□□□□□ -0.81
SYNE2Q8WXH0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SYNE2Q8WXH0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC9.97□□□□□ -0.81
SYNE2Q8WXH0 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SYNE2Q8WXH0 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SYNE2Q8WXH0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC9.97□□□□□ -0.81
SYNE2Q8WXH0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SYNE2Q8WXH0 AC027682.1-201ENST00000562846 899 ntBASIC9.97□□□□□ -0.81
SYNE2Q8WXH0 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SYNE2Q8WXH0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
SYNE2Q8WXH0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SYNE2Q8WXH0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SYNE2Q8WXH0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
SYNE2Q8WXH0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC9.96□□□□□ -0.81
SYNE2Q8WXH0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC9.96□□□□□ -0.81
SYNE2Q8WXH0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC9.96□□□□□ -0.82
SYNE2Q8WXH0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC9.96□□□□□ -0.82
SYNE2Q8WXH0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
SYNE2Q8WXH0 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
SYNE2Q8WXH0 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC9.96□□□□□ -0.82
SYNE2Q8WXH0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SYNE2Q8WXH0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC9.95□□□□□ -0.82
SYNE2Q8WXH0 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SYNE2Q8WXH0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SYNE2Q8WXH0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC9.95□□□□□ -0.82
SYNE2Q8WXH0 AC006970.2-201ENST00000450065 779 ntBASIC9.95□□□□□ -0.82
SYNE2Q8WXH0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC9.95□□□□□ -0.82
SYNE2Q8WXH0 AL596275.1-201ENST00000423464 877 ntBASIC9.95□□□□□ -0.82
SYNE2Q8WXH0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC9.95□□□□□ -0.82
SYNE2Q8WXH0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SYNE2Q8WXH0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SYNE2Q8WXH0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC9.95□□□□□ -0.82
SYNE2Q8WXH0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms