Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shisa3Q3UPR0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shisa3Q3UPR0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shisa3Q3UPR0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Shisa3Q3UPR0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Shisa3Q3UPR0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Shisa3Q3UPR0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shisa3Q3UPR0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shisa3Q3UPR0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shisa3Q3UPR0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.46■□□□□ 0.55
Shisa3Q3UPR0 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.46■□□□□ 0.55
Shisa3Q3UPR0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shisa3Q3UPR0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
Shisa3Q3UPR0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shisa3Q3UPR0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shisa3Q3UPR0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Shisa3Q3UPR0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.45■□□□□ 0.54
Shisa3Q3UPR0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shisa3Q3UPR0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Shisa3Q3UPR0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa3Q3UPR0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa3Q3UPR0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa3Q3UPR0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Shisa3Q3UPR0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.44■□□□□ 0.54
Shisa3Q3UPR0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa3Q3UPR0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa3Q3UPR0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa3Q3UPR0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa3Q3UPR0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shisa3Q3UPR0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shisa3Q3UPR0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.43■□□□□ 0.54
Shisa3Q3UPR0 Gm45364-201ENSMUST00000210883 159 ntBASIC18.43■□□□□ 0.54
Shisa3Q3UPR0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shisa3Q3UPR0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Shisa3Q3UPR0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.43■□□□□ 0.54
Shisa3Q3UPR0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shisa3Q3UPR0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shisa3Q3UPR0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shisa3Q3UPR0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Shisa3Q3UPR0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa3Q3UPR0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa3Q3UPR0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa3Q3UPR0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa3Q3UPR0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa3Q3UPR0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa3Q3UPR0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shisa3Q3UPR0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shisa3Q3UPR0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shisa3Q3UPR0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shisa3Q3UPR0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shisa3Q3UPR0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa3Q3UPR0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Shisa3Q3UPR0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Shisa3Q3UPR0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Shisa3Q3UPR0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa3Q3UPR0 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.4■□□□□ 0.54
Shisa3Q3UPR0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa3Q3UPR0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa3Q3UPR0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa3Q3UPR0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.4■□□□□ 0.54
Shisa3Q3UPR0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.4■□□□□ 0.54
Shisa3Q3UPR0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Shisa3Q3UPR0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa3Q3UPR0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa3Q3UPR0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa3Q3UPR0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.39■□□□□ 0.53
Shisa3Q3UPR0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa3Q3UPR0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa3Q3UPR0 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.39■□□□□ 0.53
Shisa3Q3UPR0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa3Q3UPR0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa3Q3UPR0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa3Q3UPR0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa3Q3UPR0 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.38■□□□□ 0.53
Shisa3Q3UPR0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa3Q3UPR0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa3Q3UPR0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa3Q3UPR0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa3Q3UPR0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Shisa3Q3UPR0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.37■□□□□ 0.53
Shisa3Q3UPR0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa3Q3UPR0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa3Q3UPR0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa3Q3UPR0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa3Q3UPR0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa3Q3UPR0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Shisa3Q3UPR0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shisa3Q3UPR0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Shisa3Q3UPR0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shisa3Q3UPR0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa3Q3UPR0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa3Q3UPR0 Gm11175-201ENSMUST00000116172 543 ntBASIC18.35■□□□□ 0.53
Shisa3Q3UPR0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa3Q3UPR0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa3Q3UPR0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Shisa3Q3UPR0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa3Q3UPR0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.35■□□□□ 0.53
Shisa3Q3UPR0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shisa3Q3UPR0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Shisa3Q3UPR0 Gm9812-201ENSMUST00000061934 968 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms