Protein–RNA interactions for Protein: Q05789

ATG38, Autophagy-related protein 38, yeastyeast

Known RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG38Q05789 SUP2tY(GUA)D 75 nt5.72□□□□□ -1.49
ATG38Q05789 SUP11tY(GUA)F1 75 nt5.72□□□□□ -1.49
ATG38Q05789 SUP6tY(GUA)F2 75 nt5.72□□□□□ -1.49
ATG38Q05789 SUP7tY(GUA)J1 75 nt5.72□□□□□ -1.49
ATG38Q05789 SUP4tY(GUA)J2 75 nt5.72□□□□□ -1.49
ATG38Q05789 SUP5tY(GUA)M1 75 nt5.72□□□□□ -1.49
ATG38Q05789 SUP8tY(GUA)M2 75 nt5.72□□□□□ -1.49
ATG38Q05789 SUP3tY(GUA)O 75 nt5.72□□□□□ -1.49
ATG38Q05789 NPA3YJR072C 1158 nt5.72□□□□□ -1.49
ATG38Q05789 RPS28AYOR167C 204 nt5.72□□□□□ -1.49
ATG38Q05789 PWP1YLR196W 1731 nt5.71□□□□□ -1.49
ATG38Q05789 YEL068CYEL068C 333 nt5.71□□□□□ -1.5
ATG38Q05789 PHO86YJL117W 936 nt5.71□□□□□ -1.5
ATG38Q05789 YMR119W-AYMR119W-A 375 nt5.71□□□□□ -1.5
ATG38Q05789 YNR040WYNR040W 771 nt5.71□□□□□ -1.5
ATG38Q05789 VPS4YPR173C 1314 nt5.71□□□□□ -1.5
ATG38Q05789 GUD1YDL238C 1470 nt5.71□□□□□ -1.5
ATG38Q05789 URA3YEL021W 804 nt5.7□□□□□ -1.5
ATG38Q05789 JJJ3YJR097W 519 nt5.7□□□□□ -1.5
ATG38Q05789 DRE2YKR071C 1047 nt5.7□□□□□ -1.5
ATG38Q05789 ARN2YHL047C 1863 nt5.7□□□□□ -1.5
ATG38Q05789 NTH2YBR001C 2343 nt5.7□□□□□ -1.5
ATG38Q05789 YDR514CYDR514C 1452 nt5.7□□□□□ -1.5
ATG38Q05789 KKQ8YKL168C 2175 nt5.69□□□□□ -1.5
ATG38Q05789 YDR034W-BYDR034W-B 156 nt5.69□□□□□ -1.5
ATG38Q05789 YHR218W-AYHR218W-A 318 nt5.69□□□□□ -1.5
ATG38Q05789 OAC1YKL120W 975 nt5.69□□□□□ -1.5
ATG38Q05789 RNH201YNL072W 924 nt5.69□□□□□ -1.5
ATG38Q05789 YBL112CYBL112C 318 nt5.69□□□□□ -1.5
ATG38Q05789 RRP9YPR137W 1722 nt5.68□□□□□ -1.5
ATG38Q05789 YDL218WYDL218W 954 nt5.68□□□□□ -1.5
ATG38Q05789 HVG1YER039C 750 nt5.68□□□□□ -1.5
ATG38Q05789 PRP24YMR268C 1335 nt5.68□□□□□ -1.5
ATG38Q05789 DRS1YLL008W 2259 nt5.68□□□□□ -1.5
ATG38Q05789 MTC5YDR128W 3447 nt5.67□□□□□ -1.5
ATG38Q05789 PFK2YMR205C 2880 nt5.67□□□□□ -1.5
ATG38Q05789 YHR213W-AYHR213W-A 234 nt5.67□□□□□ -1.5
ATG38Q05789 MDH1YKL085W 1005 nt5.67□□□□□ -1.5
ATG38Q05789 YPR114WYPR114W 948 nt5.67□□□□□ -1.5
ATG38Q05789 PIF1YML061C 2580 nt5.67□□□□□ -1.5
ATG38Q05789 GPA2YER020W 1350 nt5.67□□□□□ -1.5
ATG38Q05789 YTP1YNL237W 1380 nt5.67□□□□□ -1.5
ATG38Q05789 MAL11YGR289C 1851 nt5.66□□□□□ -1.5
ATG38Q05789 ICL1YER065C 1674 nt5.66□□□□□ -1.5
ATG38Q05789 KCH1YJR054W 1494 nt5.66□□□□□ -1.5
ATG38Q05789 FRS2YFL022C 1512 nt5.66□□□□□ -1.5
ATG38Q05789 PYK2YOR347C 1521 nt5.66□□□□□ -1.5
ATG38Q05789 YER186CYER186C 921 nt5.66□□□□□ -1.5
ATG38Q05789 MSP1YGR028W 1089 nt5.66□□□□□ -1.5
ATG38Q05789 TIF2YJL138C 1188 nt5.66□□□□□ -1.5
ATG38Q05789 TIF1YKR059W 1188 nt5.66□□□□□ -1.5
ATG38Q05789 YMR295CYMR295C 594 nt5.66□□□□□ -1.5
ATG38Q05789 DAP1YPL170W 459 nt5.66□□□□□ -1.5
ATG38Q05789 YDL129WYDL129W 876 nt5.65□□□□□ -1.5
ATG38Q05789 YLR296WYLR296W 327 nt5.65□□□□□ -1.5
ATG38Q05789 YML083CYML083C 1257 nt5.65□□□□□ -1.5
ATG38Q05789 CNE1YAL058W 1509 nt5.64□□□□□ -1.51
ATG38Q05789 PYC2YBR218C 3543 nt5.64□□□□□ -1.51
ATG38Q05789 RPL12AYEL054C 498 nt5.64□□□□□ -1.51
ATG38Q05789 RPT6YGL048C 1218 nt5.64□□□□□ -1.51
ATG38Q05789 HAP2YGL237C 798 nt5.64□□□□□ -1.51
ATG38Q05789 SRY1YKL218C 981 nt5.64□□□□□ -1.51
ATG38Q05789 CKA2YOR061W 1020 nt5.64□□□□□ -1.51
ATG38Q05789 MKK2YPL140C 1521 nt5.64□□□□□ -1.51
ATG38Q05789 CDC34YDR054C 888 nt5.63□□□□□ -1.51
ATG38Q05789 RPE1YJL121C 717 nt5.63□□□□□ -1.51
ATG38Q05789 YMR135W-AYMR135W-A 534 nt5.63□□□□□ -1.51
ATG38Q05789 AIM17YHL021C 1398 nt5.63□□□□□ -1.51
ATG38Q05789 COR1YBL045C 1374 nt5.63□□□□□ -1.51
ATG38Q05789 MCX1YBR227C 1563 nt5.63□□□□□ -1.51
ATG38Q05789 UBA1YKL210W 3075 nt5.62□□□□□ -1.51
ATG38Q05789 MDH3YDL078C 1032 nt5.62□□□□□ -1.51
ATG38Q05789 PMP3YDR276C 168 nt5.62□□□□□ -1.51
ATG38Q05789 YGL185CYGL185C 1140 nt5.62□□□□□ -1.51
ATG38Q05789 RPL10YLR075W 666 nt5.62□□□□□ -1.51
ATG38Q05789 FSF1YOR271C 984 nt5.62□□□□□ -1.51
ATG38Q05789 CAM1YPL048W 1248 nt5.62□□□□□ -1.51
ATG38Q05789 ATG4YNL223W 1485 nt5.62□□□□□ -1.51
ATG38Q05789 GAT1YFL021W 1533 nt5.62□□□□□ -1.51
ATG38Q05789 GAS3YMR215W 1575 nt5.62□□□□□ -1.51
ATG38Q05789 MDM31YHR194W 1740 nt5.62□□□□□ -1.51
ATG38Q05789 AFT1YGL071W 2073 nt5.62□□□□□ -1.51
ATG38Q05789 ATE1YGL017W 1512 nt5.61□□□□□ -1.51
ATG38Q05789 YJR085CYJR085C 318 nt5.61□□□□□ -1.51
ATG38Q05789 EFM3YJR129C 1020 nt5.61□□□□□ -1.51
ATG38Q05789 YMD8YML038C 1329 nt5.61□□□□□ -1.51
ATG38Q05789 HOF1YMR032W 2010 nt5.61□□□□□ -1.51
ATG38Q05789 YNL285WYNL285W 372 nt5.61□□□□□ -1.51
ATG38Q05789 VMA4YOR332W 702 nt5.61□□□□□ -1.51
ATG38Q05789 DBP9YLR276C 1785 nt5.6□□□□□ -1.51
ATG38Q05789 DBF2YGR092W 1719 nt5.6□□□□□ -1.51
ATG38Q05789 DSF1YEL070W 1509 nt5.6□□□□□ -1.51
ATG38Q05789 YNR073CYNR073C 1509 nt5.6□□□□□ -1.51
ATG38Q05789 MCM3YEL032W 2916 nt5.6□□□□□ -1.51
ATG38Q05789 QRI1YDL103C 1434 nt5.6□□□□□ -1.51
ATG38Q05789 WTM2YOR229W 1404 nt5.6□□□□□ -1.51
ATG38Q05789 tR(ACG)DtR(ACG)D 73 nt5.6□□□□□ -1.51
ATG38Q05789 tR(ACG)EtR(ACG)E 73 nt5.6□□□□□ -1.51
ATG38Q05789 tR(ACG)KtR(ACG)K 73 nt5.6□□□□□ -1.51
ATG38Q05789 tR(ACG)LtR(ACG)L 73 nt5.6□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms