Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 RAD59YDL059C 717 nt5.97□□□□□ -1.45
UPF3P48412 MRS1YIR021W 1092 nt5.97□□□□□ -1.45
UPF3P48412 ICT1YLR099C 1185 nt5.97□□□□□ -1.45
UPF3P48412 MTF1YMR228W 1026 nt5.97□□□□□ -1.45
UPF3P48412 PAT1YCR077C 2391 nt5.97□□□□□ -1.45
UPF3P48412 AFG1YEL052W 1530 nt5.97□□□□□ -1.45
UPF3P48412 YPR196WYPR196W 1413 nt5.97□□□□□ -1.45
UPF3P48412 YHL017WYHL017W 1599 nt5.97□□□□□ -1.45
UPF3P48412 RBA50YDR527W 1320 nt5.97□□□□□ -1.45
UPF3P48412 PGK1YCR012W 1251 nt5.96□□□□□ -1.46
UPF3P48412 YIR043CYIR043C 693 nt5.96□□□□□ -1.46
UPF3P48412 VPS24YKL041W 675 nt5.96□□□□□ -1.46
UPF3P48412 GLC8YMR311C 690 nt5.96□□□□□ -1.46
UPF3P48412 QNS1YHR074W 2145 nt5.96□□□□□ -1.46
UPF3P48412 ILV1YER086W 1731 nt5.96□□□□□ -1.46
UPF3P48412 YDR514CYDR514C 1452 nt5.96□□□□□ -1.46
UPF3P48412 YCK1YHR135C 1617 nt5.96□□□□□ -1.46
UPF3P48412 SAC6YDR129C 1929 nt5.95□□□□□ -1.46
UPF3P48412 XBP1YIL101C 1944 nt5.95□□□□□ -1.46
UPF3P48412 GEX1YCL073C 1848 nt5.95□□□□□ -1.46
UPF3P48412 GUP2YPL189W 1830 nt5.95□□□□□ -1.46
UPF3P48412 TDH2YJR009C 999 nt5.95□□□□□ -1.46
UPF3P48412 YML018CYML018C 1182 nt5.95□□□□□ -1.46
UPF3P48412 YML083CYML083C 1257 nt5.95□□□□□ -1.46
UPF3P48412 APM1YPL259C 1428 nt5.95□□□□□ -1.46
UPF3P48412 RGD1YBR260C 2001 nt5.95□□□□□ -1.46
UPF3P48412 YOL036WYOL036W 2286 nt5.95□□□□□ -1.46
UPF3P48412 UGO1YDR470C 1509 nt5.94□□□□□ -1.46
UPF3P48412 YTP1YNL237W 1380 nt5.94□□□□□ -1.46
UPF3P48412 APN1YKL114C 1104 nt5.94□□□□□ -1.46
UPF3P48412 SCS7YMR272C 1155 nt5.94□□□□□ -1.46
UPF3P48412 AST1YBL069W 1290 nt5.94□□□□□ -1.46
UPF3P48412 WHI4YDL224C 1950 nt5.94□□□□□ -1.46
UPF3P48412 GPI18YBR004C 1302 nt5.94□□□□□ -1.46
UPF3P48412 WTM1YOR230W 1314 nt5.94□□□□□ -1.46
UPF3P48412 NSI1YDR026C 1713 nt5.94□□□□□ -1.46
UPF3P48412 RRP9YPR137W 1722 nt5.94□□□□□ -1.46
UPF3P48412 LPL1YOR059C 1353 nt5.93□□□□□ -1.46
UPF3P48412 YEL075W-AYEL075W-A 612 nt5.93□□□□□ -1.46
UPF3P48412 GAL83YER027C 1254 nt5.93□□□□□ -1.46
UPF3P48412 MPM1YJL066C 759 nt5.93□□□□□ -1.46
UPF3P48412 YLR463CYLR463C 552 nt5.93□□□□□ -1.46
UPF3P48412 TIP41YPR040W 1071 nt5.93□□□□□ -1.46
UPF3P48412 FRE7YOL152W 1863 nt5.93□□□□□ -1.46
UPF3P48412 PRT1YOR361C 2292 nt5.93□□□□□ -1.46
UPF3P48412 SPC97YHR172W 2472 nt5.93□□□□□ -1.46
UPF3P48412 CCZ1YBR131W 2115 nt5.93□□□□□ -1.46
UPF3P48412 PMA1YGL008C 2757 nt5.93□□□□□ -1.46
UPF3P48412 VRP1YLR337C 2454 nt5.92□□□□□ -1.46
UPF3P48412 RVB2YPL235W 1416 nt5.92□□□□□ -1.46
UPF3P48412 SDH4YDR178W 546 nt5.92□□□□□ -1.46
UPF3P48412 IPK1YDR315C 846 nt5.92□□□□□ -1.46
UPF3P48412 OAC1YKL120W 975 nt5.92□□□□□ -1.46
UPF3P48412 AAT2YLR027C 1257 nt5.92□□□□□ -1.46
UPF3P48412 YOL163WYOL163W 510 nt5.92□□□□□ -1.46
UPF3P48412 YPL136WYPL136W 369 nt5.92□□□□□ -1.46
UPF3P48412 STE13YOR219C 2796 nt5.92□□□□□ -1.46
UPF3P48412 YBR138CYBR138C 1575 nt5.92□□□□□ -1.46
UPF3P48412 FAA4YMR246W 2085 nt5.92□□□□□ -1.46
UPF3P48412 LSG1YGL099W 1923 nt5.91□□□□□ -1.46
UPF3P48412 RMD9YGL107C 1941 nt5.91□□□□□ -1.46
UPF3P48412 MNN5YJL186W 1761 nt5.91□□□□□ -1.46
UPF3P48412 POR2YIL114C 846 nt5.91□□□□□ -1.46
UPF3P48412 YMR119W-AYMR119W-A 375 nt5.91□□□□□ -1.46
UPF3P48412 MTQ1YNL063W 945 nt5.91□□□□□ -1.46
UPF3P48412 MRPL10YNL284C 969 nt5.91□□□□□ -1.46
UPF3P48412 HMT1YBR034C 1047 nt5.91□□□□□ -1.46
UPF3P48412 IFA38YBR159W 1044 nt5.91□□□□□ -1.46
UPF3P48412 GUD1YDL238C 1470 nt5.9□□□□□ -1.46
UPF3P48412 WHI2YOR043W 1461 nt5.9□□□□□ -1.46
UPF3P48412 CNE1YAL058W 1509 nt5.9□□□□□ -1.46
UPF3P48412 YHL018WYHL018W 363 nt5.9□□□□□ -1.46
UPF3P48412 EFM3YJR129C 1020 nt5.9□□□□□ -1.46
UPF3P48412 PML1YLR016C 615 nt5.9□□□□□ -1.46
UPF3P48412 ADD37YMR184W 597 nt5.9□□□□□ -1.46
UPF3P48412 COA2YPL189C-A 207 nt5.9□□□□□ -1.46
UPF3P48412 YPR150WYPR150W 522 nt5.9□□□□□ -1.46
UPF3P48412 UBX2YML013W 1755 nt5.9□□□□□ -1.47
UPF3P48412 CRF1YDR223W 1404 nt5.9□□□□□ -1.47
UPF3P48412 BZZ1YHR114W 1902 nt5.89□□□□□ -1.47
UPF3P48412 ATR1YML116W 1629 nt5.89□□□□□ -1.47
UPF3P48412 RPT3YDR394W 1287 nt5.89□□□□□ -1.47
UPF3P48412 ECM14YHR132C 1293 nt5.89□□□□□ -1.47
UPF3P48412 BCY1YIL033C 1251 nt5.89□□□□□ -1.47
UPF3P48412 OSW5YMR148W 447 nt5.89□□□□□ -1.47
UPF3P48412 TEP1YNL128W 1305 nt5.89□□□□□ -1.47
UPF3P48412 FAT3YKL187C 2253 nt5.88□□□□□ -1.47
UPF3P48412 TAH18YPR048W 1872 nt5.88□□□□□ -1.47
UPF3P48412 RRP1YDR087C 837 nt5.88□□□□□ -1.47
UPF3P48412 YLR184WYLR184W 348 nt5.88□□□□□ -1.47
UPF3P48412 ALG5YPL227C 1005 nt5.88□□□□□ -1.47
UPF3P48412 RPT1YKL145W 1404 nt5.88□□□□□ -1.47
UPF3P48412 ARH1YDR376W 1482 nt5.88□□□□□ -1.47
UPF3P48412 FYV1YDR024W 486 nt5.87□□□□□ -1.47
UPF3P48412 MRS3YJL133W 945 nt5.87□□□□□ -1.47
UPF3P48412 IMD1YAR073W 1212 nt5.87□□□□□ -1.47
UPF3P48412 YMR295CYMR295C 594 nt5.87□□□□□ -1.47
UPF3P48412 RRS1YOR294W 612 nt5.87□□□□□ -1.47
UPF3P48412 SLD2YKL108W 1362 nt5.87□□□□□ -1.47
UPF3P48412 YPL245WYPL245W 1365 nt5.87□□□□□ -1.47
Retrieved 100 of 7,029 protein–RNA pairs in 25 ms