Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ClppO88696 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ClppO88696 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ClppO88696 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ClppO88696 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.81■□□□□ 0.92
ClppO88696 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ClppO88696 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ClppO88696 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
ClppO88696 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ClppO88696 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.8■□□□□ 0.92
ClppO88696 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ClppO88696 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ClppO88696 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.79■□□□□ 0.92
ClppO88696 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ClppO88696 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
ClppO88696 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ClppO88696 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ClppO88696 Gm45102-201ENSMUST00000207427 857 ntBASIC20.79■□□□□ 0.92
ClppO88696 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ClppO88696 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ClppO88696 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ClppO88696 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ClppO88696 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ClppO88696 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ClppO88696 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ClppO88696 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ClppO88696 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ClppO88696 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ClppO88696 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.77■□□□□ 0.91
ClppO88696 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ClppO88696 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ClppO88696 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ClppO88696 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.76■□□□□ 0.91
ClppO88696 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ClppO88696 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ClppO88696 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ClppO88696 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ClppO88696 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ClppO88696 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.75■□□□□ 0.91
ClppO88696 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
ClppO88696 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ClppO88696 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ClppO88696 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.74■□□□□ 0.91
ClppO88696 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ClppO88696 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ClppO88696 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ClppO88696 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ClppO88696 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ClppO88696 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ClppO88696 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ClppO88696 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ClppO88696 Gm10232-201ENSMUST00000089221 720 ntBASIC20.73■□□□□ 0.91
ClppO88696 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ClppO88696 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ClppO88696 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ClppO88696 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.72■□□□□ 0.91
ClppO88696 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ClppO88696 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ClppO88696 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ClppO88696 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ClppO88696 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ClppO88696 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ClppO88696 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ClppO88696 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ClppO88696 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
ClppO88696 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
ClppO88696 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ClppO88696 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.69■□□□□ 0.9
ClppO88696 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ClppO88696 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ClppO88696 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ClppO88696 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ClppO88696 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ClppO88696 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ClppO88696 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.68■□□□□ 0.9
ClppO88696 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ClppO88696 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.68■□□□□ 0.9
ClppO88696 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
ClppO88696 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ClppO88696 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ClppO88696 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ClppO88696 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ClppO88696 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ClppO88696 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ClppO88696 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.67■□□□□ 0.9
ClppO88696 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ClppO88696 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ClppO88696 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ClppO88696 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ClppO88696 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ClppO88696 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ClppO88696 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ClppO88696 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ClppO88696 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ClppO88696 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ClppO88696 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ClppO88696 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
ClppO88696 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ClppO88696 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.65■□□□□ 0.9
ClppO88696 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 8 ms