Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Matn3O35701 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Matn3O35701 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.42■□□□□ 0.7
Matn3O35701 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.42■□□□□ 0.7
Matn3O35701 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Matn3O35701 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Matn3O35701 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Matn3O35701 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Matn3O35701 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Matn3O35701 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Matn3O35701 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Matn3O35701 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Matn3O35701 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Matn3O35701 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Matn3O35701 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Matn3O35701 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Matn3O35701 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Matn3O35701 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Matn3O35701 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.4■□□□□ 0.7
Matn3O35701 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Matn3O35701 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Matn3O35701 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Matn3O35701 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Matn3O35701 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Matn3O35701 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Matn3O35701 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Matn3O35701 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.39■□□□□ 0.69
Matn3O35701 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.39■□□□□ 0.69
Matn3O35701 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Matn3O35701 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Matn3O35701 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Matn3O35701 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Matn3O35701 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Matn3O35701 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Matn3O35701 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Matn3O35701 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Matn3O35701 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Matn3O35701 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Matn3O35701 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Matn3O35701 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Matn3O35701 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Matn3O35701 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Matn3O35701 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Matn3O35701 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Matn3O35701 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Matn3O35701 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Matn3O35701 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Matn3O35701 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Matn3O35701 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Matn3O35701 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Matn3O35701 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Matn3O35701 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Matn3O35701 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Matn3O35701 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.36■□□□□ 0.69
Matn3O35701 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Matn3O35701 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Matn3O35701 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.36■□□□□ 0.69
Matn3O35701 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Matn3O35701 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Matn3O35701 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.36■□□□□ 0.69
Matn3O35701 Nkain2-201ENSMUST00000092602 558 ntBASIC19.36■□□□□ 0.69
Matn3O35701 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Matn3O35701 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Matn3O35701 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Matn3O35701 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.35■□□□□ 0.69
Matn3O35701 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.35■□□□□ 0.69
Matn3O35701 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Matn3O35701 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Matn3O35701 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Matn3O35701 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Matn3O35701 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Matn3O35701 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Matn3O35701 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Matn3O35701 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Matn3O35701 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.34■□□□□ 0.69
Matn3O35701 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Matn3O35701 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Matn3O35701 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Matn3O35701 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Matn3O35701 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.33■□□□□ 0.69
Matn3O35701 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Matn3O35701 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Matn3O35701 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Matn3O35701 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.33■□□□□ 0.68
Matn3O35701 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Matn3O35701 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Matn3O35701 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Matn3O35701 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Matn3O35701 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Matn3O35701 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Matn3O35701 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Matn3O35701 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Matn3O35701 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Matn3O35701 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Matn3O35701 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.32■□□□□ 0.68
Matn3O35701 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Matn3O35701 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Matn3O35701 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Matn3O35701 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Matn3O35701 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms