Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh1F7BJK1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh1F7BJK1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh1F7BJK1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh1F7BJK1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh1F7BJK1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh1F7BJK1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh1F7BJK1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh1F7BJK1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh1F7BJK1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh1F7BJK1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh1F7BJK1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh1F7BJK1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh1F7BJK1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh1F7BJK1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh1F7BJK1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh1F7BJK1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh1F7BJK1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pcdh1F7BJK1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh1F7BJK1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pcdh1F7BJK1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh1F7BJK1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh1F7BJK1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh1F7BJK1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.26■□□□□ 0.67
Pcdh1F7BJK1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.26■□□□□ 0.67
Pcdh1F7BJK1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh1F7BJK1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh1F7BJK1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh1F7BJK1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh1F7BJK1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh1F7BJK1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh1F7BJK1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh1F7BJK1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.25■□□□□ 0.67
Pcdh1F7BJK1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh1F7BJK1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh1F7BJK1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh1F7BJK1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pcdh1F7BJK1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh1F7BJK1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh1F7BJK1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Pcdh1F7BJK1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh1F7BJK1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh1F7BJK1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh1F7BJK1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh1F7BJK1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.24■□□□□ 0.67
Pcdh1F7BJK1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh1F7BJK1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh1F7BJK1 Notumos-201ENSMUST00000151998 2659 ntBASIC19.24■□□□□ 0.67
Pcdh1F7BJK1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdh1F7BJK1 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.24■□□□□ 0.67
Pcdh1F7BJK1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh1F7BJK1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh1F7BJK1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pcdh1F7BJK1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh1F7BJK1 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.23■□□□□ 0.67
Pcdh1F7BJK1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh1F7BJK1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh1F7BJK1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh1F7BJK1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Pcdh1F7BJK1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh1F7BJK1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Pcdh1F7BJK1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh1F7BJK1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh1F7BJK1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh1F7BJK1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh1F7BJK1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh1F7BJK1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh1F7BJK1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh1F7BJK1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh1F7BJK1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh1F7BJK1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdh1F7BJK1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh1F7BJK1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.2■□□□□ 0.66
Pcdh1F7BJK1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh1F7BJK1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh1F7BJK1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdh1F7BJK1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.19■□□□□ 0.66
Pcdh1F7BJK1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.19■□□□□ 0.66
Pcdh1F7BJK1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh1F7BJK1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdh1F7BJK1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh1F7BJK1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh1F7BJK1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh1F7BJK1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Pcdh1F7BJK1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdh1F7BJK1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh1F7BJK1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh1F7BJK1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh1F7BJK1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pcdh1F7BJK1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh1F7BJK1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh1F7BJK1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
Pcdh1F7BJK1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
Pcdh1F7BJK1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh1F7BJK1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.17■□□□□ 0.66
Pcdh1F7BJK1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdh1F7BJK1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pcdh1F7BJK1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh1F7BJK1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh1F7BJK1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 162.8 ms