Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC10.77□□□□□ -0.69
Gm3880A0A1B0GSB3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm3880A0A1B0GSB3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Gm3880A0A1B0GSB3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Gm3880A0A1B0GSB3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm3880A0A1B0GSB3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Gm3880A0A1B0GSB3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm3880A0A1B0GSB3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm3880A0A1B0GSB3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Gm3880A0A1B0GSB3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm3880A0A1B0GSB3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC10.76□□□□□ -0.69
Gm3880A0A1B0GSB3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC10.76□□□□□ -0.69
Gm3880A0A1B0GSB3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm3880A0A1B0GSB3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm3880A0A1B0GSB3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC10.76□□□□□ -0.69
Gm3880A0A1B0GSB3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm3880A0A1B0GSB3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Gm3880A0A1B0GSB3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm3880A0A1B0GSB3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Gm3880A0A1B0GSB3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm3880A0A1B0GSB3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm3880A0A1B0GSB3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm3880A0A1B0GSB3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm3880A0A1B0GSB3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Gm3880A0A1B0GSB3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Gm3880A0A1B0GSB3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm3880A0A1B0GSB3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm3880A0A1B0GSB3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm3880A0A1B0GSB3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm3880A0A1B0GSB3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm3880A0A1B0GSB3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm3880A0A1B0GSB3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm3880A0A1B0GSB3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm3880A0A1B0GSB3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm3880A0A1B0GSB3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm3880A0A1B0GSB3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Gm3880A0A1B0GSB3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Gm3880A0A1B0GSB3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Gm3880A0A1B0GSB3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm3880A0A1B0GSB3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm3880A0A1B0GSB3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm3880A0A1B0GSB3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm3880A0A1B0GSB3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm3880A0A1B0GSB3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Gm3880A0A1B0GSB3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm3880A0A1B0GSB3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Gm3880A0A1B0GSB3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gm3880A0A1B0GSB3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm3880A0A1B0GSB3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm3880A0A1B0GSB3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC10.73□□□□□ -0.69
Gm3880A0A1B0GSB3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC10.73□□□□□ -0.69
Gm3880A0A1B0GSB3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Gm3880A0A1B0GSB3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm3880A0A1B0GSB3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm3880A0A1B0GSB3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm3880A0A1B0GSB3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Gm3880A0A1B0GSB3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm3880A0A1B0GSB3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm3880A0A1B0GSB3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm3880A0A1B0GSB3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Gm3880A0A1B0GSB3 Gm42699-201ENSMUST00000198104 1657 ntBASIC10.72□□□□□ -0.69
Gm3880A0A1B0GSB3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm3880A0A1B0GSB3 Pcf11-205ENSMUST00000208255 1720 ntBASIC10.72□□□□□ -0.69
Gm3880A0A1B0GSB3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Gm3880A0A1B0GSB3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Gm3880A0A1B0GSB3 Gm12504-201ENSMUST00000120860 2231 ntBASIC10.72□□□□□ -0.69
Gm3880A0A1B0GSB3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm3880A0A1B0GSB3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm3880A0A1B0GSB3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC10.71□□□□□ -0.69
Gm3880A0A1B0GSB3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm3880A0A1B0GSB3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC10.71□□□□□ -0.69
Gm3880A0A1B0GSB3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm3880A0A1B0GSB3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Gm3880A0A1B0GSB3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC10.71□□□□□ -0.69
Gm3880A0A1B0GSB3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm3880A0A1B0GSB3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm3880A0A1B0GSB3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm3880A0A1B0GSB3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Gm3880A0A1B0GSB3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Gm3880A0A1B0GSB3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Gm3880A0A1B0GSB3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Gm3880A0A1B0GSB3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Gm3880A0A1B0GSB3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm3880A0A1B0GSB3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Gm3880A0A1B0GSB3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm3880A0A1B0GSB3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm3880A0A1B0GSB3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Gm3880A0A1B0GSB3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Gm3880A0A1B0GSB3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm3880A0A1B0GSB3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm3880A0A1B0GSB3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm3880A0A1B0GSB3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC10.7□□□□□ -0.7
Gm3880A0A1B0GSB3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Gm3880A0A1B0GSB3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm3880A0A1B0GSB3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Gm3880A0A1B0GSB3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Gm3880A0A1B0GSB3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Gm3880A0A1B0GSB3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm3880A0A1B0GSB3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Gm3880A0A1B0GSB3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms