Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.09■□□□□ 0.17
CSNK1G3Q9Y6M4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
CSNK1G3Q9Y6M4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSNK1G3Q9Y6M4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CSNK1G3Q9Y6M4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CSNK1G3Q9Y6M4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CSNK1G3Q9Y6M4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSNK1G3Q9Y6M4 CETN4P-206ENST00000642099 2168 ntBASIC16.09■□□□□ 0.17
CSNK1G3Q9Y6M4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSNK1G3Q9Y6M4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CSNK1G3Q9Y6M4 AL671710.1-201ENST00000610245 2349 ntBASIC16.08■□□□□ 0.17
CSNK1G3Q9Y6M4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.08■□□□□ 0.17
CSNK1G3Q9Y6M4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.08■□□□□ 0.17
CSNK1G3Q9Y6M4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.08■□□□□ 0.17
CSNK1G3Q9Y6M4 SNX33P1-201ENST00000592116 1762 ntBASIC16.08■□□□□ 0.17
CSNK1G3Q9Y6M4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CSNK1G3Q9Y6M4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CSNK1G3Q9Y6M4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CSNK1G3Q9Y6M4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CSNK1G3Q9Y6M4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CSNK1G3Q9Y6M4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CSNK1G3Q9Y6M4 AC092053.1-201ENST00000605787 1936 ntBASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 PIN1P1-201ENST00000412108 996 ntBASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 AC005034.1-201ENST00000426657 489 ntBASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 SERBP1P5-201ENST00000510079 1181 ntBASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 RN7SL828P-201ENST00000607615 303 ntBASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 AC012645.4-201ENST00000610691 1061 ntBASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 AL035252.4-201ENST00000624174 288 ntBASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 AC087499.5-201ENST00000452760 1342 ntBASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSNK1G3Q9Y6M4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms