Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 KRT18P13-201ENST00000400056 1290 ntBASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 UPF3AP3-201ENST00000420996 769 ntBASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 FAM58CP-201ENST00000435741 640 ntBASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 AC068418.2-201ENST00000577309 3703 ntBASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 AL603756.1-201ENST00000606511 2163 ntBASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PARPBPQ9NWS1 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PARPBPQ9NWS1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PARPBPQ9NWS1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PARPBPQ9NWS1 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.77□□□□□ -0.04
PARPBPQ9NWS1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.77□□□□□ -0.04
PARPBPQ9NWS1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PARPBPQ9NWS1 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PARPBPQ9NWS1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PARPBPQ9NWS1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PARPBPQ9NWS1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PARPBPQ9NWS1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.77□□□□□ -0.04
PARPBPQ9NWS1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
PARPBPQ9NWS1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PARPBPQ9NWS1 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.77□□□□□ -0.04
PARPBPQ9NWS1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PARPBPQ9NWS1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
PARPBPQ9NWS1 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
PARPBPQ9NWS1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PARPBPQ9NWS1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
PARPBPQ9NWS1 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 HTR5BP-201ENST00000430851 1154 ntBASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 AC020765.3-201ENST00000613051 740 ntBASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 AC091812.2-201ENST00000619081 385 ntBASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PARPBPQ9NWS1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 AC106886.4-201ENST00000623557 2502 ntBASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms