Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC005225.3-201ENST00000555972 519 ntTSL 2 BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 NEK4P2-201ENST00000580004 1012 ntBASIC19.58■□□□□ 0.72
RTN4Q9NQC3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 AC010947.1-201ENST00000623454 693 ntBASIC19.58■□□□□ 0.72
RTN4Q9NQC3 LINC01451-201ENST00000623792 534 ntBASIC19.58■□□□□ 0.72
RTN4Q9NQC3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 AC092865.7-201ENST00000641832 219 ntBASIC19.57■□□□□ 0.72
RTN4Q9NQC3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4Q9NQC3 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.56■□□□□ 0.72
RTN4Q9NQC3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 AC128688.1-201ENST00000487626 519 ntBASIC19.56■□□□□ 0.72
RTN4Q9NQC3 AC113404.2-201ENST00000507884 177 ntBASIC19.56■□□□□ 0.72
RTN4Q9NQC3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 FAM87A-204ENST00000613235 858 ntBASIC19.56■□□□□ 0.72
RTN4Q9NQC3 AL157888.1-201ENST00000631930 593 ntBASIC19.56■□□□□ 0.72
RTN4Q9NQC3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RTN4Q9NQC3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 ODCP-201ENST00000459650 1639 ntBASIC19.55■□□□□ 0.72
RTN4Q9NQC3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 TSPY15P-201ENST00000457163 923 ntBASIC19.55■□□□□ 0.72
RTN4Q9NQC3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms