Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CDCA3Q99618 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.92■□□□□ 0.3
CDCA3Q99618 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.92■□□□□ 0.3
CDCA3Q99618 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.92■□□□□ 0.3
CDCA3Q99618 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.92■□□□□ 0.3
CDCA3Q99618 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CDCA3Q99618 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CDCA3Q99618 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
CDCA3Q99618 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.92■□□□□ 0.3
CDCA3Q99618 AC005229.1-201ENST00000392885 409 ntBASIC16.92■□□□□ 0.3
CDCA3Q99618 AC099336.1-201ENST00000417053 1171 ntBASIC16.92■□□□□ 0.3
CDCA3Q99618 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.92■□□□□ 0.3
CDCA3Q99618 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.92■□□□□ 0.3
CDCA3Q99618 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.92■□□□□ 0.3
CDCA3Q99618 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.92■□□□□ 0.3
CDCA3Q99618 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.92■□□□□ 0.3
CDCA3Q99618 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDCA3Q99618 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.92■□□□□ 0.3
CDCA3Q99618 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.92■□□□□ 0.3
CDCA3Q99618 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.92■□□□□ 0.3
CDCA3Q99618 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 LINC01144-201ENST00000626198 1710 ntBASIC16.92■□□□□ 0.3
CDCA3Q99618 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 PCGF3-213ENST00000620529 1899 ntBASIC16.92■□□□□ 0.3
CDCA3Q99618 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CDCA3Q99618 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.92■□□□□ 0.3
CDCA3Q99618 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.91■□□□□ 0.3
CDCA3Q99618 AL645728.1-201ENST00000366221 2101 ntBASIC16.91■□□□□ 0.3
CDCA3Q99618 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.91■□□□□ 0.3
CDCA3Q99618 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.91■□□□□ 0.3
CDCA3Q99618 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA3Q99618 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA3Q99618 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDCA3Q99618 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDCA3Q99618 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CDCA3Q99618 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA3Q99618 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA3Q99618 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA3Q99618 AC006538.1-201ENST00000567905 1585 ntBASIC16.91■□□□□ 0.3
CDCA3Q99618 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDCA3Q99618 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA3Q99618 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA3Q99618 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CDCA3Q99618 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA3Q99618 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA3Q99618 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA3Q99618 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA3Q99618 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.91■□□□□ 0.3
CDCA3Q99618 AC004987.2-201ENST00000395959 1148 ntBASIC16.91■□□□□ 0.3
CDCA3Q99618 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.91■□□□□ 0.3
CDCA3Q99618 CSF2RBP1-201ENST00000447905 391 ntBASIC16.91■□□□□ 0.3
CDCA3Q99618 RPL13AP25-201ENST00000484130 612 ntBASIC16.91■□□□□ 0.3
CDCA3Q99618 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.91■□□□□ 0.3
CDCA3Q99618 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.91■□□□□ 0.3
CDCA3Q99618 PTP4A1P2-201ENST00000546033 454 ntBASIC16.91■□□□□ 0.3
CDCA3Q99618 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA3Q99618 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA3Q99618 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA3Q99618 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA3Q99618 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA3Q99618 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA3Q99618 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA3Q99618 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.9■□□□□ 0.3
CDCA3Q99618 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA3Q99618 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA3Q99618 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA3Q99618 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CDCA3Q99618 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.9■□□□□ 0.3
CDCA3Q99618 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.9■□□□□ 0.3
CDCA3Q99618 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.9■□□□□ 0.3
CDCA3Q99618 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.9■□□□□ 0.3
CDCA3Q99618 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.9■□□□□ 0.3
CDCA3Q99618 RPL13P2-201ENST00000440687 659 ntBASIC16.9■□□□□ 0.3
CDCA3Q99618 RPL7P3-201ENST00000441388 714 ntBASIC16.9■□□□□ 0.3
CDCA3Q99618 EEF1DP4-201ENST00000446006 880 ntBASIC16.9■□□□□ 0.3
CDCA3Q99618 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.9■□□□□ 0.3
CDCA3Q99618 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.9■□□□□ 0.3
CDCA3Q99618 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.9■□□□□ 0.3
CDCA3Q99618 AC103810.3-201ENST00000583567 96 ntBASIC16.9■□□□□ 0.3
CDCA3Q99618 BRI3BPP1-201ENST00000594224 787 ntBASIC16.9■□□□□ 0.3
CDCA3Q99618 LINC01115-203ENST00000606068 577 ntBASIC16.9■□□□□ 0.3
CDCA3Q99618 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA3Q99618 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms