Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.55■□□□□ 0.56
FGD4Q96M96 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.55■□□□□ 0.56
FGD4Q96M96 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.55■□□□□ 0.56
FGD4Q96M96 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.55■□□□□ 0.56
FGD4Q96M96 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.55■□□□□ 0.56
FGD4Q96M96 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.55■□□□□ 0.56
FGD4Q96M96 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
FGD4Q96M96 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.55■□□□□ 0.56
FGD4Q96M96 AL139384.1-201ENST00000612143 3047 ntBASIC18.55■□□□□ 0.56
FGD4Q96M96 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FGD4Q96M96 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.55■□□□□ 0.56
FGD4Q96M96 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FGD4Q96M96 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
FGD4Q96M96 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FGD4Q96M96 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.55■□□□□ 0.56
FGD4Q96M96 AL603756.1-201ENST00000606511 2163 ntBASIC18.55■□□□□ 0.56
FGD4Q96M96 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FGD4Q96M96 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
FGD4Q96M96 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FGD4Q96M96 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.54■□□□□ 0.56
FGD4Q96M96 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FGD4Q96M96 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
FGD4Q96M96 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FGD4Q96M96 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.54■□□□□ 0.56
FGD4Q96M96 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FGD4Q96M96 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
FGD4Q96M96 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
FGD4Q96M96 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FGD4Q96M96 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
FGD4Q96M96 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FGD4Q96M96 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FGD4Q96M96 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
FGD4Q96M96 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.54■□□□□ 0.56
FGD4Q96M96 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FGD4Q96M96 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FGD4Q96M96 U91328.1-201ENST00000437528 223 ntBASIC18.54■□□□□ 0.56
FGD4Q96M96 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.54■□□□□ 0.56
FGD4Q96M96 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FGD4Q96M96 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.54■□□□□ 0.56
FGD4Q96M96 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.54■□□□□ 0.56
FGD4Q96M96 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.54■□□□□ 0.56
FGD4Q96M96 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
FGD4Q96M96 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.54■□□□□ 0.56
FGD4Q96M96 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.54■□□□□ 0.56
FGD4Q96M96 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
FGD4Q96M96 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.54■□□□□ 0.56
FGD4Q96M96 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
FGD4Q96M96 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FGD4Q96M96 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FGD4Q96M96 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.54■□□□□ 0.56
FGD4Q96M96 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.54■□□□□ 0.56
FGD4Q96M96 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FGD4Q96M96 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.54■□□□□ 0.56
FGD4Q96M96 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.53■□□□□ 0.56
FGD4Q96M96 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FGD4Q96M96 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FGD4Q96M96 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.53■□□□□ 0.56
FGD4Q96M96 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
FGD4Q96M96 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FGD4Q96M96 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
FGD4Q96M96 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FGD4Q96M96 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
FGD4Q96M96 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FGD4Q96M96 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
FGD4Q96M96 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FGD4Q96M96 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
FGD4Q96M96 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
FGD4Q96M96 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
FGD4Q96M96 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FGD4Q96M96 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.53■□□□□ 0.56
FGD4Q96M96 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FGD4Q96M96 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FGD4Q96M96 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
FGD4Q96M96 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FGD4Q96M96 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
FGD4Q96M96 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FGD4Q96M96 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FGD4Q96M96 AL353779.1-201ENST00000434793 351 ntBASIC18.53■□□□□ 0.56
FGD4Q96M96 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
FGD4Q96M96 AC114501.2-201ENST00000439631 535 ntBASIC18.53■□□□□ 0.56
FGD4Q96M96 RN7SL618P-201ENST00000477850 296 ntBASIC18.53■□□□□ 0.56
FGD4Q96M96 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FGD4Q96M96 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.53■□□□□ 0.56
FGD4Q96M96 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FGD4Q96M96 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.53■□□□□ 0.56
FGD4Q96M96 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.53■□□□□ 0.56
FGD4Q96M96 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.53■□□□□ 0.56
FGD4Q96M96 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
FGD4Q96M96 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
FGD4Q96M96 WASH4P-201ENST00000564273 1246 ntBASIC18.53■□□□□ 0.56
FGD4Q96M96 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.53■□□□□ 0.56
FGD4Q96M96 AC140912.1-201ENST00000577171 1054 ntBASIC18.53■□□□□ 0.56
FGD4Q96M96 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.53■□□□□ 0.56
FGD4Q96M96 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.53■□□□□ 0.56
FGD4Q96M96 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.53■□□□□ 0.56
FGD4Q96M96 CHCHD2P3-201ENST00000603038 451 ntBASIC18.53■□□□□ 0.56
FGD4Q96M96 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.53■□□□□ 0.56
FGD4Q96M96 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.53■□□□□ 0.56
FGD4Q96M96 AC020765.3-201ENST00000613051 740 ntBASIC18.53■□□□□ 0.56
FGD4Q96M96 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms