Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 DERL2-202ENST00000570848 657 ntTSL 5 BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 AC080080.1-201ENST00000625121 2420 ntBASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 AL592424.1-201ENST00000563624 1536 ntBASIC25.28■■□□□ 1.64
CFAP43Q8NDM7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
CFAP43Q8NDM7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
CFAP43Q8NDM7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CFAP43Q8NDM7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CFAP43Q8NDM7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC25.28■■□□□ 1.64
CFAP43Q8NDM7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC25.28■■□□□ 1.64
CFAP43Q8NDM7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC25.28■■□□□ 1.64
CFAP43Q8NDM7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CFAP43Q8NDM7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CFAP43Q8NDM7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CFAP43Q8NDM7 PARP8-206ENST00000503665 572 ntTSL 4 BASIC25.28■■□□□ 1.64
CFAP43Q8NDM7 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC25.28■■□□□ 1.64
CFAP43Q8NDM7 AGER-214ENST00000538695 487 ntTSL 2 BASIC25.28■■□□□ 1.64
CFAP43Q8NDM7 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CFAP43Q8NDM7 AL033527.5-201ENST00000641382 801 ntBASIC25.28■■□□□ 1.64
CFAP43Q8NDM7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC25.28■■□□□ 1.64
CFAP43Q8NDM7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
CFAP43Q8NDM7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 AC092506.1-202ENST00000401022 528 ntBASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 GOLGA2P4-201ENST00000441462 777 ntBASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 CSF2RBP1-201ENST00000447905 391 ntBASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 AC074044.1-201ENST00000609673 707 ntBASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 UBALD1-205ENST00000590891 2641 ntBASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC25.27■■□□□ 1.64
CFAP43Q8NDM7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 AC103810.3-201ENST00000583567 96 ntBASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 BRWD1P1-201ENST00000401091 371 ntBASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 POU5F1P6-201ENST00000466990 990 ntBASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 RHOQP1-201ENST00000555758 579 ntBASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 AC243960.2-201ENST00000600996 747 ntBASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
CFAP43Q8NDM7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 U82695.1-201ENST00000635752 1889 ntBASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms