Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 AP002472.1-201ENST00000577490 586 ntBASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 WASH6P-202ENST00000359512 1437 ntBASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 AC092919.2-201ENST00000623631 1645 ntBASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 AC016027.1-202ENST00000607927 1699 ntBASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 AL596087.1-201ENST00000400979 1969 ntBASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CDRT4Q8N9R6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 AL022342.1-201ENST00000400363 863 ntBASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 KRT18P58-201ENST00000527480 1120 ntBASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 AC040169.1-201ENST00000565382 521 ntBASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 AC092865.6-201ENST00000642101 219 ntBASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT4Q8N9R6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 AL592424.1-201ENST00000563624 1536 ntBASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CDRT4Q8N9R6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms