Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 AL627223.1-201ENST00000416693 442 ntBASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 FAM58DP-201ENST00000428076 619 ntBASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 AC098859.1-201ENST00000502915 1238 ntBASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 AC004835.2-201ENST00000603762 682 ntBASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 AL691403.2-201ENST00000618460 490 ntBASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.54□□□□□ -0.08
ZIC4Q8N9L1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 AL139384.1-201ENST00000612143 3047 ntBASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 MTHFR-217ENST00000641820 1569 ntBASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 UXT-AS1-201ENST00000590504 1525 ntBASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 CNN2P11-201ENST00000429351 262 ntBASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 AC005237.2-201ENST00000434368 219 ntBASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 DNAJB3-202ENST00000449667 1266 ntBASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 SLC25A39P2-201ENST00000537614 270 ntBASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 AL596442.2-201ENST00000610240 980 ntBASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 CYP2T1P-202ENST00000641596 2535 ntBASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 AC006449.6-201ENST00000612330 2296 ntBASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC4Q8N9L1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.52□□□□□ -0.08
ZIC4Q8N9L1 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.52□□□□□ -0.08
ZIC4Q8N9L1 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.52□□□□□ -0.08
ZIC4Q8N9L1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
ZIC4Q8N9L1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.52□□□□□ -0.08
ZIC4Q8N9L1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.52□□□□□ -0.08
ZIC4Q8N9L1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZIC4Q8N9L1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
ZIC4Q8N9L1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZIC4Q8N9L1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZIC4Q8N9L1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.52□□□□□ -0.08
ZIC4Q8N9L1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
ZIC4Q8N9L1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZIC4Q8N9L1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms