Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MIR574-201ENST00000385209 96 ntBASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 AC023274.1-201ENST00000418278 595 ntBASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 AC112191.1-201ENST00000523689 701 ntBASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 AC040169.1-201ENST00000565382 521 ntBASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 REXO1L8P-201ENST00000604378 1897 ntBASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 WASH6P-202ENST00000359512 1437 ntBASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC65Q8IXS2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 AL513523.2-202ENST00000427283 2040 ntBASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 POLD2P1-201ENST00000511220 997 ntBASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 TNRC18P3-201ENST00000441896 2691 ntBASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC65Q8IXS2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.27■□□□□ 0.51
CCDC65Q8IXS2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC65Q8IXS2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC65Q8IXS2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CCDC65Q8IXS2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC65Q8IXS2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC65Q8IXS2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC65Q8IXS2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CCDC65Q8IXS2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC65Q8IXS2 AC026691.1-201ENST00000602502 2017 ntBASIC18.27■□□□□ 0.51
CCDC65Q8IXS2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms