Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF20Q5VTR2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF20Q5VTR2 RNA5SP416-201ENST00000516838 111 ntBASIC19.69■□□□□ 0.74
RNF20Q5VTR2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF20Q5VTR2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RNF20Q5VTR2 AC106730.1-201ENST00000566722 1090 ntBASIC19.69■□□□□ 0.74
RNF20Q5VTR2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF20Q5VTR2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
RNF20Q5VTR2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF20Q5VTR2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF20Q5VTR2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF20Q5VTR2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF20Q5VTR2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF20Q5VTR2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF20Q5VTR2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF20Q5VTR2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF20Q5VTR2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.69■□□□□ 0.74
RNF20Q5VTR2 REXO1L8P-201ENST00000604378 1897 ntBASIC19.69■□□□□ 0.74
RNF20Q5VTR2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RNF20Q5VTR2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 AC092474.2-201ENST00000424288 719 ntBASIC19.68■□□□□ 0.74
RNF20Q5VTR2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 AC027601.4-201ENST00000611259 610 ntBASIC19.68■□□□□ 0.74
RNF20Q5VTR2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF20Q5VTR2 AC005622.1-201ENST00000636801 1703 ntBASIC19.68■□□□□ 0.74
RNF20Q5VTR2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 AL162727.3-201ENST00000635661 2787 ntBASIC19.67■□□□□ 0.74
RNF20Q5VTR2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.67■□□□□ 0.74
RNF20Q5VTR2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 KRT18P34-201ENST00000488218 1270 ntBASIC19.67■□□□□ 0.74
RNF20Q5VTR2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 SLC25A1P1-201ENST00000528351 927 ntBASIC19.67■□□□□ 0.74
RNF20Q5VTR2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF20Q5VTR2 U82695.1-201ENST00000635752 1889 ntBASIC19.67■□□□□ 0.74
RNF20Q5VTR2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms