Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 AC126755.1-201ENST00000525846 6405 ntBASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 AL031284.1-201ENST00000419297 478 ntBASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 AC105339.3-201ENST00000560043 636 ntBASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 SLC25A6P4-201ENST00000586535 553 ntBASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 AC148477.8-201ENST00000624298 468 ntBASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 FAM215A-202ENST00000632077 792 ntBASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 PGM5P2-202ENST00000637225 1043 ntBASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 ME2P1-201ENST00000426028 1970 ntBASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
ATPAF1Q5TC12 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 C8orf49-201ENST00000525043 1968 ntBASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 AC073621.1-201ENST00000392730 636 ntBASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 MRPL3P1-201ENST00000400109 1033 ntBASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 RNA5SP419-201ENST00000515908 135 ntBASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms