Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RSPO4Q2I0M5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RSPO4Q2I0M5 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RSPO4Q2I0M5 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RSPO4Q2I0M5 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.83■□□□□ 0.12
RSPO4Q2I0M5 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RSPO4Q2I0M5 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.83■□□□□ 0.12
RSPO4Q2I0M5 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RSPO4Q2I0M5 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RSPO4Q2I0M5 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
RSPO4Q2I0M5 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RSPO4Q2I0M5 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RSPO4Q2I0M5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 AC104457.1-201ENST00000401024 814 ntBASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 AL355864.2-201ENST00000447420 863 ntBASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 AC005077.2-201ENST00000449786 690 ntBASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 PTP4A1P2-201ENST00000546033 454 ntBASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 AC026740.1-201ENST00000607068 791 ntBASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 AC026979.3-201ENST00000607315 403 ntBASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RSPO4Q2I0M5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 AC026954.1-201ENST00000429771 1293 ntBASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 RN7SL399P-201ENST00000471648 279 ntBASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 TMEM198B-204ENST00000484016 896 ntBASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 AC074044.1-201ENST00000609673 707 ntBASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO4Q2I0M5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 NOC2LP2-201ENST00000407594 1944 ntBASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 AL607033.1-201ENST00000623900 1599 ntBASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 HTR7P1-202ENST00000624664 4411 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms