Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRPHP41219 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRPHP41219 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRPHP41219 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
PRPHP41219 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRPHP41219 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRPHP41219 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRPHP41219 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
PRPHP41219 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRPHP41219 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRPHP41219 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRPHP41219 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PRPHP41219 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRPHP41219 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PRPHP41219 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PRPHP41219 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.58■□□□□ 0.57
PRPHP41219 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
PRPHP41219 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PRPHP41219 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PRPHP41219 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.58■□□□□ 0.56
PRPHP41219 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRPHP41219 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.58■□□□□ 0.56
PRPHP41219 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PRPHP41219 AL355306.1-201ENST00000415580 579 ntBASIC18.58■□□□□ 0.56
PRPHP41219 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.58■□□□□ 0.56
PRPHP41219 FAM58CP-201ENST00000435741 640 ntBASIC18.58■□□□□ 0.56
PRPHP41219 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.58■□□□□ 0.56
PRPHP41219 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.58■□□□□ 0.56
PRPHP41219 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PRPHP41219 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRPHP41219 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PRPHP41219 AC046158.3-201ENST00000624947 2558 ntBASIC18.58■□□□□ 0.56
PRPHP41219 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.58■□□□□ 0.56
PRPHP41219 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PRPHP41219 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRPHP41219 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.57■□□□□ 0.56
PRPHP41219 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.57■□□□□ 0.56
PRPHP41219 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
PRPHP41219 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PRPHP41219 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.57■□□□□ 0.56
PRPHP41219 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 PCDH8P1-201ENST00000428983 2773 ntBASIC18.57■□□□□ 0.56
PRPHP41219 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PRPHP41219 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
PRPHP41219 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.57■□□□□ 0.56
PRPHP41219 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.57■□□□□ 0.56
PRPHP41219 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.57■□□□□ 0.56
PRPHP41219 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.57■□□□□ 0.56
PRPHP41219 MTDHP5-201ENST00000598980 586 ntBASIC18.57■□□□□ 0.56
PRPHP41219 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
PRPHP41219 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.57■□□□□ 0.56
PRPHP41219 C20orf181-201ENST00000623918 480 ntBASIC18.57■□□□□ 0.56
PRPHP41219 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.57■□□□□ 0.56
PRPHP41219 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
PRPHP41219 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.57■□□□□ 0.56
PRPHP41219 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
PRPHP41219 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PRPHP41219 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PRPHP41219 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRPHP41219 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRPHP41219 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
PRPHP41219 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRPHP41219 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRPHP41219 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRPHP41219 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRPHP41219 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PRPHP41219 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRPHP41219 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.56■□□□□ 0.56
PRPHP41219 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
PRPHP41219 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRPHP41219 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.56■□□□□ 0.56
PRPHP41219 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.56■□□□□ 0.56
PRPHP41219 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.56■□□□□ 0.56
PRPHP41219 MKNK2P1-201ENST00000437526 628 ntBASIC18.56■□□□□ 0.56
PRPHP41219 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
PRPHP41219 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
PRPHP41219 ACTG1P14-201ENST00000446382 1122 ntBASIC18.56■□□□□ 0.56
PRPHP41219 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRPHP41219 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.56■□□□□ 0.56
PRPHP41219 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms