Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFRAP16234 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.29■□□□□ 0.36
PDGFRAP16234 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PDGFRAP16234 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFRAP16234 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFRAP16234 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.29■□□□□ 0.36
PDGFRAP16234 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.29■□□□□ 0.36
PDGFRAP16234 FAM58CP-201ENST00000435741 640 ntBASIC17.29■□□□□ 0.36
PDGFRAP16234 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.29■□□□□ 0.36
PDGFRAP16234 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFRAP16234 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PDGFRAP16234 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PDGFRAP16234 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFRAP16234 DOC2GP-204ENST00000639052 2548 ntBASIC17.29■□□□□ 0.36
PDGFRAP16234 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFRAP16234 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFRAP16234 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.29■□□□□ 0.36
PDGFRAP16234 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.29■□□□□ 0.36
PDGFRAP16234 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFRAP16234 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFRAP16234 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFRAP16234 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFRAP16234 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.29■□□□□ 0.36
PDGFRAP16234 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFRAP16234 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFRAP16234 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFRAP16234 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.28■□□□□ 0.36
PDGFRAP16234 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.28■□□□□ 0.36
PDGFRAP16234 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.28■□□□□ 0.36
PDGFRAP16234 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.28■□□□□ 0.36
PDGFRAP16234 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PDGFRAP16234 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PDGFRAP16234 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFRAP16234 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.28■□□□□ 0.36
PDGFRAP16234 KRT18P34-201ENST00000488218 1270 ntBASIC17.28■□□□□ 0.36
PDGFRAP16234 AC112191.1-201ENST00000523689 701 ntBASIC17.28■□□□□ 0.36
PDGFRAP16234 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFRAP16234 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PDGFRAP16234 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFRAP16234 MIR4469-201ENST00000583919 79 ntBASIC17.28■□□□□ 0.36
PDGFRAP16234 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.28■□□□□ 0.36
PDGFRAP16234 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.28■□□□□ 0.36
PDGFRAP16234 AC091812.2-201ENST00000619081 385 ntBASIC17.28■□□□□ 0.36
PDGFRAP16234 AL161645.1-201ENST00000622716 1255 ntBASIC17.28■□□□□ 0.36
PDGFRAP16234 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFRAP16234 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.28■□□□□ 0.36
PDGFRAP16234 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFRAP16234 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFRAP16234 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFRAP16234 AC016027.1-202ENST00000607927 1699 ntBASIC17.28■□□□□ 0.36
PDGFRAP16234 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFRAP16234 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFRAP16234 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFRAP16234 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.28■□□□□ 0.36
PDGFRAP16234 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFRAP16234 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.28■□□□□ 0.36
PDGFRAP16234 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFRAP16234 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PDGFRAP16234 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFRAP16234 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFRAP16234 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PDGFRAP16234 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFRAP16234 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.27■□□□□ 0.36
PDGFRAP16234 AC005622.1-201ENST00000636801 1703 ntBASIC17.27■□□□□ 0.36
PDGFRAP16234 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFRAP16234 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFRAP16234 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PDGFRAP16234 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFRAP16234 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFRAP16234 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.27■□□□□ 0.36
PDGFRAP16234 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFRAP16234 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PDGFRAP16234 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PDGFRAP16234 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.27■□□□□ 0.36
PDGFRAP16234 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFRAP16234 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.27■□□□□ 0.36
PDGFRAP16234 RPS8P6-201ENST00000426177 609 ntBASIC17.27■□□□□ 0.36
PDGFRAP16234 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFRAP16234 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PDGFRAP16234 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PDGFRAP16234 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.27■□□□□ 0.36
PDGFRAP16234 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PDGFRAP16234 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.27■□□□□ 0.36
PDGFRAP16234 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
PDGFRAP16234 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFRAP16234 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFRAP16234 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.27■□□□□ 0.36
PDGFRAP16234 AC134684.3-201ENST00000641758 218 ntBASIC17.27■□□□□ 0.36
PDGFRAP16234 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFRAP16234 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.27■□□□□ 0.36
PDGFRAP16234 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFRAP16234 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDGFRAP16234 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
PDGFRAP16234 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
PDGFRAP16234 TNRC18P3-201ENST00000441896 2691 ntBASIC17.27■□□□□ 0.35
PDGFRAP16234 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
PDGFRAP16234 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
PDGFRAP16234 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.27■□□□□ 0.35
PDGFRAP16234 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDGFRAP16234 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms