Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSDP07339 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CTSDP07339 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSDP07339 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSDP07339 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSDP07339 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSDP07339 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSDP07339 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CTSDP07339 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSDP07339 AC079776.2-201ENST00000641154 1609 ntBASIC13.72□□□□□ -0.21
CTSDP07339 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSDP07339 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSDP07339 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.72□□□□□ -0.21
CTSDP07339 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CTSDP07339 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CTSDP07339 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSDP07339 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSDP07339 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSDP07339 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSDP07339 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSDP07339 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CTSDP07339 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.72□□□□□ -0.21
CTSDP07339 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CTSDP07339 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.72□□□□□ -0.21
CTSDP07339 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.72□□□□□ -0.21
CTSDP07339 BNIP3P18-201ENST00000593976 575 ntBASIC13.72□□□□□ -0.21
CTSDP07339 Z69720.1-201ENST00000601483 472 ntBASIC13.72□□□□□ -0.21
CTSDP07339 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.72□□□□□ -0.21
CTSDP07339 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSDP07339 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSDP07339 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSDP07339 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CTSDP07339 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSDP07339 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSDP07339 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSDP07339 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSDP07339 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CTSDP07339 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CTSDP07339 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CTSDP07339 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSDP07339 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CTSDP07339 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSDP07339 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSDP07339 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CTSDP07339 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.71□□□□□ -0.21
CTSDP07339 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.71□□□□□ -0.21
CTSDP07339 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 AC233702.3-201ENST00000578656 1387 ntBASIC13.71□□□□□ -0.21
CTSDP07339 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.71□□□□□ -0.21
CTSDP07339 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.71□□□□□ -0.21
CTSDP07339 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
CTSDP07339 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.71□□□□□ -0.21
CTSDP07339 FLJ16779-201ENST00000612722 7638 ntBASIC13.71□□□□□ -0.21
CTSDP07339 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.71□□□□□ -0.21
CTSDP07339 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 AC131009.4-201ENST00000624048 1740 ntBASIC13.71□□□□□ -0.21
CTSDP07339 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.71□□□□□ -0.21
CTSDP07339 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.71□□□□□ -0.21
CTSDP07339 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 AL136038.3-201ENST00000561909 1096 ntBASIC13.71□□□□□ -0.21
CTSDP07339 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 AC087388.1-201ENST00000571370 1112 ntBASIC13.71□□□□□ -0.21
CTSDP07339 AL121672.3-201ENST00000608644 468 ntBASIC13.71□□□□□ -0.21
CTSDP07339 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 AC020765.3-201ENST00000613051 740 ntBASIC13.71□□□□□ -0.21
CTSDP07339 PGM5P2-202ENST00000637225 1043 ntBASIC13.71□□□□□ -0.21
CTSDP07339 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSDP07339 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CTSDP07339 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.71□□□□□ -0.22
CTSDP07339 FAM45BP-202ENST00000592932 1624 ntBASIC13.71□□□□□ -0.22
CTSDP07339 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.71□□□□□ -0.22
CTSDP07339 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CTSDP07339 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CTSDP07339 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CTSDP07339 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CTSDP07339 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.71□□□□□ -0.22
CTSDP07339 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.71□□□□□ -0.22
CTSDP07339 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTSDP07339 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CTSDP07339 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.7□□□□□ -0.22
CTSDP07339 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
CTSDP07339 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms