Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM3P06753 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.54■□□□□ 0.56
TPM3P06753 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
TPM3P06753 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.54■□□□□ 0.56
TPM3P06753 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPM3P06753 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPM3P06753 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TPM3P06753 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TPM3P06753 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPM3P06753 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.54■□□□□ 0.56
TPM3P06753 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPM3P06753 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
TPM3P06753 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TPM3P06753 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM3P06753 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM3P06753 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPM3P06753 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.54■□□□□ 0.56
TPM3P06753 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPM3P06753 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TPM3P06753 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM3P06753 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC18.53■□□□□ 0.56
TPM3P06753 LINC02447-202ENST00000501888 2146 ntBASIC18.53■□□□□ 0.56
TPM3P06753 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.53■□□□□ 0.56
TPM3P06753 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.53■□□□□ 0.56
TPM3P06753 AC148477.5-201ENST00000625164 1645 ntBASIC18.53■□□□□ 0.56
TPM3P06753 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.53■□□□□ 0.56
TPM3P06753 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.53■□□□□ 0.56
TPM3P06753 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TPM3P06753 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.53■□□□□ 0.56
TPM3P06753 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.53■□□□□ 0.56
TPM3P06753 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.53■□□□□ 0.56
TPM3P06753 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.53■□□□□ 0.56
TPM3P06753 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.53■□□□□ 0.56
TPM3P06753 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.53■□□□□ 0.56
TPM3P06753 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC18.53■□□□□ 0.56
TPM3P06753 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.53■□□□□ 0.56
TPM3P06753 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TPM3P06753 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.53■□□□□ 0.56
TPM3P06753 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.53■□□□□ 0.56
TPM3P06753 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.53■□□□□ 0.56
TPM3P06753 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.53■□□□□ 0.56
TPM3P06753 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
TPM3P06753 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TPM3P06753 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM3P06753 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.53■□□□□ 0.56
TPM3P06753 INTS4P1-201ENST00000438455 1935 ntBASIC18.53■□□□□ 0.56
TPM3P06753 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.52■□□□□ 0.56
TPM3P06753 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TPM3P06753 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM3P06753 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM3P06753 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TPM3P06753 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM3P06753 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM3P06753 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM3P06753 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM3P06753 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TPM3P06753 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
TPM3P06753 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM3P06753 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM3P06753 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TPM3P06753 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TPM3P06753 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM3P06753 SPDYE21P-201ENST00000413323 827 ntBASIC18.52■□□□□ 0.56
TPM3P06753 CHCHD2P8-201ENST00000429873 447 ntBASIC18.52■□□□□ 0.56
TPM3P06753 MINOS1P3-201ENST00000457048 203 ntBASIC18.52■□□□□ 0.56
TPM3P06753 AC022616.7-201ENST00000525383 220 ntBASIC18.52■□□□□ 0.56
TPM3P06753 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TPM3P06753 Z69720.1-201ENST00000601483 472 ntBASIC18.52■□□□□ 0.56
TPM3P06753 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.52■□□□□ 0.56
TPM3P06753 AL121672.3-201ENST00000608644 468 ntBASIC18.52■□□□□ 0.56
TPM3P06753 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.52■□□□□ 0.56
TPM3P06753 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.52■□□□□ 0.56
TPM3P06753 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.52■□□□□ 0.56
TPM3P06753 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC18.52■□□□□ 0.56
TPM3P06753 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM3P06753 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TPM3P06753 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms