Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.25■□□□□ 0.35
TRUB2O95900 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRUB2O95900 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.25■□□□□ 0.35
TRUB2O95900 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.25■□□□□ 0.35
TRUB2O95900 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.24■□□□□ 0.35
TRUB2O95900 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
TRUB2O95900 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRUB2O95900 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TRUB2O95900 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRUB2O95900 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRUB2O95900 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TRUB2O95900 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 TIMM8BP1-201ENST00000452384 211 ntBASIC17.24■□□□□ 0.35
TRUB2O95900 RN7SL589P-201ENST00000481268 310 ntBASIC17.24■□□□□ 0.35
TRUB2O95900 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.24■□□□□ 0.35
TRUB2O95900 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.24■□□□□ 0.35
TRUB2O95900 AC243562.1-201ENST00000560672 389 ntBASIC17.24■□□□□ 0.35
TRUB2O95900 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.24■□□□□ 0.35
TRUB2O95900 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.24■□□□□ 0.35
TRUB2O95900 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.24■□□□□ 0.35
TRUB2O95900 AC105339.1-204ENST00000636249 355 ntBASIC17.24■□□□□ 0.35
TRUB2O95900 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.24■□□□□ 0.35
TRUB2O95900 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.24■□□□□ 0.35
TRUB2O95900 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.24■□□□□ 0.35
TRUB2O95900 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.24■□□□□ 0.35
TRUB2O95900 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.24■□□□□ 0.35
TRUB2O95900 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRUB2O95900 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRUB2O95900 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRUB2O95900 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRUB2O95900 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRUB2O95900 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRUB2O95900 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRUB2O95900 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
TRUB2O95900 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRUB2O95900 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRUB2O95900 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRUB2O95900 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.23■□□□□ 0.35
TRUB2O95900 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRUB2O95900 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRUB2O95900 AL596087.1-201ENST00000400979 1969 ntBASIC17.23■□□□□ 0.35
TRUB2O95900 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.23■□□□□ 0.35
TRUB2O95900 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRUB2O95900 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRUB2O95900 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRUB2O95900 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRUB2O95900 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.23■□□□□ 0.35
TRUB2O95900 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRUB2O95900 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.23■□□□□ 0.35
TRUB2O95900 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.23■□□□□ 0.35
TRUB2O95900 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
TRUB2O95900 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.23■□□□□ 0.35
TRUB2O95900 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.23■□□□□ 0.35
TRUB2O95900 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.23■□□□□ 0.35
TRUB2O95900 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.23■□□□□ 0.35
TRUB2O95900 AC006538.3-201ENST00000612495 578 ntBASIC17.23■□□□□ 0.35
TRUB2O95900 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.23■□□□□ 0.35
TRUB2O95900 AL691403.2-201ENST00000618460 490 ntBASIC17.23■□□□□ 0.35
TRUB2O95900 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRUB2O95900 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRUB2O95900 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRUB2O95900 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.23■□□□□ 0.35
TRUB2O95900 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRUB2O95900 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRUB2O95900 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.23■□□□□ 0.35
TRUB2O95900 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRUB2O95900 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.23■□□□□ 0.35
TRUB2O95900 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRUB2O95900 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRUB2O95900 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.23■□□□□ 0.35
TRUB2O95900 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.23■□□□□ 0.35
TRUB2O95900 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.23■□□□□ 0.35
TRUB2O95900 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRUB2O95900 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRUB2O95900 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
TRUB2O95900 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.22■□□□□ 0.35
TRUB2O95900 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.22■□□□□ 0.35
TRUB2O95900 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms