Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC008741.2-201ENST00000612792 3115 ntBASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ELL2P1-201ENST00000413990 1906 ntBASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AL162727.3-201ENST00000635661 2787 ntBASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AC254562.1-201ENST00000417586 456 ntBASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 FAM185BP-201ENST00000443595 716 ntBASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 YBX1P5-201ENST00000509441 847 ntBASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PCDHA1-201ENST00000378133 2726 ntBASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CICP6-201ENST00000457191 2729 ntBASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRBV4S1A1TA0A5B7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 LINC00895-201ENST00000629028 1637 ntBASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PMS2P2-201ENST00000425039 1128 ntBASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CNN2P11-201ENST00000429351 262 ntBASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PAWRP1-201ENST00000451083 565 ntBASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AC087163.2-201ENST00000457299 853 ntBASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AC092364.2-201ENST00000596710 2692 ntBASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms