Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PIF1Q9H611 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.83■□□□□ 0.12
PIF1Q9H611 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PIF1Q9H611 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.83■□□□□ 0.12
PIF1Q9H611 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
PIF1Q9H611 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PIF1Q9H611 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.83■□□□□ 0.12
PIF1Q9H611 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PIF1Q9H611 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.83■□□□□ 0.12
PIF1Q9H611 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
PIF1Q9H611 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.83■□□□□ 0.12
PIF1Q9H611 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.83■□□□□ 0.12
PIF1Q9H611 TERC-201ENST00000602385 541 ntBASIC15.83■□□□□ 0.12
PIF1Q9H611 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PIF1Q9H611 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PIF1Q9H611 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
PIF1Q9H611 AL590787.1-201ENST00000568856 1315 ntBASIC15.83■□□□□ 0.12
PIF1Q9H611 AC092850.2-201ENST00000623821 2697 ntBASIC15.83■□□□□ 0.12
PIF1Q9H611 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PIF1Q9H611 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PIF1Q9H611 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
PIF1Q9H611 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
PIF1Q9H611 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PIF1Q9H611 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.83■□□□□ 0.12
PIF1Q9H611 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.83■□□□□ 0.12
PIF1Q9H611 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 AL161772.1-201ENST00000610494 4412 ntBASIC15.82■□□□□ 0.12
PIF1Q9H611 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PIF1Q9H611 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PIF1Q9H611 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 AL365209.1-201ENST00000624418 6473 ntBASIC15.82■□□□□ 0.12
PIF1Q9H611 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.82■□□□□ 0.12
PIF1Q9H611 AC006449.6-201ENST00000612330 2296 ntBASIC15.82■□□□□ 0.12
PIF1Q9H611 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PIF1Q9H611 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PIF1Q9H611 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PIF1Q9H611 IGHV3-47-201ENST00000425060 335 ntBASIC15.82■□□□□ 0.12
PIF1Q9H611 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.82■□□□□ 0.12
PIF1Q9H611 AC013467.2-201ENST00000605472 835 ntBASIC15.82■□□□□ 0.12
PIF1Q9H611 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PIF1Q9H611 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PIF1Q9H611 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.82■□□□□ 0.12
PIF1Q9H611 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PIF1Q9H611 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.82■□□□□ 0.12
PIF1Q9H611 AL512652.2-201ENST00000625156 1716 ntBASIC15.82■□□□□ 0.12
PIF1Q9H611 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.82■□□□□ 0.12
PIF1Q9H611 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 SNX33P1-201ENST00000592116 1762 ntBASIC15.82■□□□□ 0.12
PIF1Q9H611 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.82■□□□□ 0.12
PIF1Q9H611 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.82■□□□□ 0.12
PIF1Q9H611 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PIF1Q9H611 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PIF1Q9H611 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.82■□□□□ 0.12
PIF1Q9H611 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PIF1Q9H611 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PIF1Q9H611 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PIF1Q9H611 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.81■□□□□ 0.12
PIF1Q9H611 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PIF1Q9H611 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
PIF1Q9H611 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PIF1Q9H611 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PIF1Q9H611 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PIF1Q9H611 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PIF1Q9H611 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.81■□□□□ 0.12
PIF1Q9H611 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PIF1Q9H611 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PIF1Q9H611 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PIF1Q9H611 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
PIF1Q9H611 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PIF1Q9H611 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PIF1Q9H611 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PIF1Q9H611 AC104819.1-201ENST00000504587 486 ntBASIC15.81■□□□□ 0.12
PIF1Q9H611 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PIF1Q9H611 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PIF1Q9H611 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.81■□□□□ 0.12
PIF1Q9H611 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.81■□□□□ 0.12
PIF1Q9H611 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.81■□□□□ 0.12
PIF1Q9H611 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PIF1Q9H611 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PIF1Q9H611 REXO1L8P-201ENST00000604378 1897 ntBASIC15.81■□□□□ 0.12
PIF1Q9H611 AC114341.1-201ENST00000618070 349 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms