Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 AC026396.1-201ENST00000419388 421 ntBASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 RNA5SP416-201ENST00000516838 111 ntBASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 SLC25A1P1-201ENST00000528351 927 ntBASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.4■□□□□ 0.06
MS4A4EQ96PG1 AL513477.1-201ENST00000602865 2407 ntBASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 AL596087.1-201ENST00000400979 1969 ntBASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 MED15P5-201ENST00000423150 992 ntBASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 KRT18P2-201ENST00000447938 1258 ntBASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 AC068137.2-201ENST00000605408 478 ntBASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 AC027601.4-201ENST00000611259 610 ntBASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms