Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 AC022532.1-201ENST00000624563 1728 ntBASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NUDCD3Q8IVD9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 GPAA1P2-202ENST00000606848 1787 ntBASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 AC005332.1-201ENST00000577698 1310 ntBASIC16.44■□□□□ 0.22
NUDCD3Q8IVD9 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 LINC00265-3P-201ENST00000447588 903 ntBASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 PRYP5-201ENST00000451909 266 ntBASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 AC064862.7-201ENST00000604520 867 ntBASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 LINC01023-201ENST00000606054 436 ntBASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 AL121956.5-201ENST00000625261 221 ntBASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 NCF1C-201ENST00000438382 1427 ntBASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms