Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 MIR6805-201ENST00000615055 62 ntBASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTC1Q2NKJ3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CTC1Q2NKJ3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
CTC1Q2NKJ3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CTC1Q2NKJ3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CTC1Q2NKJ3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTC1Q2NKJ3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.58■□□□□ 0.4
CTC1Q2NKJ3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTC1Q2NKJ3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTC1Q2NKJ3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTC1Q2NKJ3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTC1Q2NKJ3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
CTC1Q2NKJ3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.58■□□□□ 0.4
CTC1Q2NKJ3 DFFBP1-201ENST00000433250 979 ntBASIC17.58■□□□□ 0.4
CTC1Q2NKJ3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.58■□□□□ 0.4
CTC1Q2NKJ3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CTC1Q2NKJ3 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CTC1Q2NKJ3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTC1Q2NKJ3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.58■□□□□ 0.4
CTC1Q2NKJ3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
CTC1Q2NKJ3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CTC1Q2NKJ3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTC1Q2NKJ3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CTC1Q2NKJ3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.58■□□□□ 0.4
CTC1Q2NKJ3 FLJ38576-201ENST00000623820 2459 ntBASIC17.58■□□□□ 0.4
CTC1Q2NKJ3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTC1Q2NKJ3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 FOXO1B-201ENST00000504678 1527 ntBASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 AL391825.1-201ENST00000457671 1364 ntBASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 RPL37AP1-201ENST00000412502 279 ntBASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 AP006294.1-201ENST00000415407 339 ntBASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 AC132938.2-201ENST00000579188 680 ntBASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 AL591163.1-201ENST00000641757 987 ntBASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTC1Q2NKJ3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 LINC00304-203ENST00000565008 1864 ntBASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms