Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PDS5AQ29RF7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PDS5AQ29RF7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.58■□□□□ 0.73
PDS5AQ29RF7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDS5AQ29RF7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PDS5AQ29RF7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
PDS5AQ29RF7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PDS5AQ29RF7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
PDS5AQ29RF7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.58■□□□□ 0.73
PDS5AQ29RF7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.58■□□□□ 0.73
PDS5AQ29RF7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.58■□□□□ 0.73
PDS5AQ29RF7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PDS5AQ29RF7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.58■□□□□ 0.73
PDS5AQ29RF7 AF228730.6-201ENST00000641497 218 ntBASIC19.58■□□□□ 0.73
PDS5AQ29RF7 AC084121.3-201ENST00000641716 218 ntBASIC19.58■□□□□ 0.73
PDS5AQ29RF7 AC105233.6-201ENST00000642093 218 ntBASIC19.58■□□□□ 0.73
PDS5AQ29RF7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDS5AQ29RF7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDS5AQ29RF7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDS5AQ29RF7 AL136982.4-201ENST00000437689 1740 ntBASIC19.58■□□□□ 0.73
PDS5AQ29RF7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDS5AQ29RF7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDS5AQ29RF7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDS5AQ29RF7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDS5AQ29RF7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PDS5AQ29RF7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDS5AQ29RF7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDS5AQ29RF7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.58■□□□□ 0.72
PDS5AQ29RF7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PDS5AQ29RF7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDS5AQ29RF7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 FO393414.2-201ENST00000405153 598 ntBASIC19.57■□□□□ 0.72
PDS5AQ29RF7 HIST3H2BA-201ENST00000436555 524 ntBASIC19.57■□□□□ 0.72
PDS5AQ29RF7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.57■□□□□ 0.72
PDS5AQ29RF7 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.57■□□□□ 0.72
PDS5AQ29RF7 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.57■□□□□ 0.72
PDS5AQ29RF7 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.57■□□□□ 0.72
PDS5AQ29RF7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 AC106886.4-201ENST00000623557 2502 ntBASIC19.57■□□□□ 0.72
PDS5AQ29RF7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PDS5AQ29RF7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms