Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.72■□□□□ 0.11
NR1H2P55055 NUS1P2-201ENST00000417358 873 ntBASIC15.72■□□□□ 0.11
NR1H2P55055 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.72■□□□□ 0.11
NR1H2P55055 SAPCD2P3-201ENST00000455031 850 ntBASIC15.72■□□□□ 0.11
NR1H2P55055 AC079776.4-201ENST00000511039 504 ntBASIC15.72■□□□□ 0.11
NR1H2P55055 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.72■□□□□ 0.11
NR1H2P55055 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.72■□□□□ 0.11
NR1H2P55055 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.72■□□□□ 0.11
NR1H2P55055 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.72■□□□□ 0.11
NR1H2P55055 AL121912.1-201ENST00000603683 238 ntBASIC15.72■□□□□ 0.11
NR1H2P55055 AC064862.7-201ENST00000604520 867 ntBASIC15.72■□□□□ 0.11
NR1H2P55055 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
NR1H2P55055 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.72■□□□□ 0.11
NR1H2P55055 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.72■□□□□ 0.11
NR1H2P55055 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H2P55055 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NR1H2P55055 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NR1H2P55055 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H2P55055 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H2P55055 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H2P55055 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H2P55055 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.72■□□□□ 0.11
NR1H2P55055 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
NR1H2P55055 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H2P55055 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NR1H2P55055 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H2P55055 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
NR1H2P55055 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H2P55055 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.71■□□□□ 0.11
NR1H2P55055 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H2P55055 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NR1H2P55055 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.71■□□□□ 0.11
NR1H2P55055 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NR1H2P55055 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.71■□□□□ 0.11
NR1H2P55055 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H2P55055 SNX18-202ENST00000343017 3140 ntBASIC15.71■□□□□ 0.11
NR1H2P55055 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H2P55055 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NR1H2P55055 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.71■□□□□ 0.11
NR1H2P55055 AP005117.1-202ENST00000581724 1908 ntBASIC15.71■□□□□ 0.11
NR1H2P55055 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H2P55055 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H2P55055 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H2P55055 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H2P55055 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H2P55055 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.71■□□□□ 0.11
NR1H2P55055 AC079781.3-201ENST00000449110 356 ntBASIC15.71■□□□□ 0.11
NR1H2P55055 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.71■□□□□ 0.11
NR1H2P55055 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.71■□□□□ 0.11
NR1H2P55055 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H2P55055 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.71■□□□□ 0.11
NR1H2P55055 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.71■□□□□ 0.11
NR1H2P55055 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.71■□□□□ 0.11
NR1H2P55055 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.71■□□□□ 0.11
NR1H2P55055 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NR1H2P55055 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H2P55055 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H2P55055 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.71■□□□□ 0.11
NR1H2P55055 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.71■□□□□ 0.11
NR1H2P55055 AC067930.6-201ENST00000623257 4947 ntBASIC15.71■□□□□ 0.11
NR1H2P55055 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H2P55055 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H2P55055 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H2P55055 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H2P55055 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H2P55055 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.71■□□□□ 0.11
NR1H2P55055 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H2P55055 KRT8P47-201ENST00000604727 1398 ntBASIC15.71■□□□□ 0.11
NR1H2P55055 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H2P55055 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.71■□□□□ 0.11
NR1H2P55055 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NR1H2P55055 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
NR1H2P55055 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
NR1H2P55055 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
NR1H2P55055 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
NR1H2P55055 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
NR1H2P55055 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NR1H2P55055 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NR1H2P55055 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
NR1H2P55055 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.71■□□□□ 0.1
NR1H2P55055 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
NR1H2P55055 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H2P55055 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H2P55055 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H2P55055 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.7■□□□□ 0.1
NR1H2P55055 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H2P55055 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.7■□□□□ 0.1
NR1H2P55055 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.7■□□□□ 0.1
NR1H2P55055 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H2P55055 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H2P55055 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NR1H2P55055 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H2P55055 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H2P55055 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NR1H2P55055 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H2P55055 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.7■□□□□ 0.1
NR1H2P55055 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H2P55055 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NR1H2P55055 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.7■□□□□ 0.1
NR1H2P55055 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms