Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.43■□□□□ 0.22
NUBP1P53384 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NUBP1P53384 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.43■□□□□ 0.22
NUBP1P53384 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.43■□□□□ 0.22
NUBP1P53384 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.43■□□□□ 0.22
NUBP1P53384 GCNT7-202ENST00000617620 1355 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NUBP1P53384 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NUBP1P53384 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.43■□□□□ 0.22
NUBP1P53384 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUBP1P53384 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NUBP1P53384 HSFY4P-201ENST00000415994 1181 ntBASIC16.43■□□□□ 0.22
NUBP1P53384 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.43■□□□□ 0.22
NUBP1P53384 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
NUBP1P53384 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.43■□□□□ 0.22
NUBP1P53384 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NUBP1P53384 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.43■□□□□ 0.22
NUBP1P53384 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC16.43■□□□□ 0.22
NUBP1P53384 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.43■□□□□ 0.22
NUBP1P53384 AC079328.1-201ENST00000560358 952 ntBASIC16.43■□□□□ 0.22
NUBP1P53384 DUX4L45-201ENST00000566406 1057 ntBASIC16.43■□□□□ 0.22
NUBP1P53384 MIR5189-201ENST00000577370 114 ntBASIC16.43■□□□□ 0.22
NUBP1P53384 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.43■□□□□ 0.22
NUBP1P53384 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.43■□□□□ 0.22
NUBP1P53384 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.43■□□□□ 0.22
NUBP1P53384 AC005332.10-201ENST00000612725 619 ntBASIC16.43■□□□□ 0.22
NUBP1P53384 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC16.43■□□□□ 0.22
NUBP1P53384 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.43■□□□□ 0.22
NUBP1P53384 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NUBP1P53384 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.43■□□□□ 0.22
NUBP1P53384 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUBP1P53384 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUBP1P53384 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUBP1P53384 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NUBP1P53384 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUBP1P53384 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.43■□□□□ 0.22
NUBP1P53384 KRT8P49-201ENST00000604166 1432 ntBASIC16.43■□□□□ 0.22
NUBP1P53384 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.43■□□□□ 0.22
NUBP1P53384 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.43■□□□□ 0.22
NUBP1P53384 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUBP1P53384 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUBP1P53384 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
NUBP1P53384 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.42■□□□□ 0.22
NUBP1P53384 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUBP1P53384 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUBP1P53384 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUBP1P53384 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUBP1P53384 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUBP1P53384 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NUBP1P53384 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NUBP1P53384 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NUBP1P53384 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUBP1P53384 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
NUBP1P53384 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.42■□□□□ 0.22
NUBP1P53384 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUBP1P53384 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUBP1P53384 ZNF626-201ENST00000291750 1123 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NUBP1P53384 LUZP4P1-201ENST00000415420 344 ntBASIC16.42■□□□□ 0.22
NUBP1P53384 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NUBP1P53384 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.42■□□□□ 0.22
NUBP1P53384 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NUBP1P53384 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.42■□□□□ 0.22
NUBP1P53384 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.42■□□□□ 0.22
NUBP1P53384 RN7SL519P-201ENST00000497925 288 ntBASIC16.42■□□□□ 0.22
NUBP1P53384 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.42■□□□□ 0.22
NUBP1P53384 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.42■□□□□ 0.22
NUBP1P53384 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.42■□□□□ 0.22
NUBP1P53384 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUBP1P53384 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.42■□□□□ 0.22
NUBP1P53384 C2orf69P2-201ENST00000562032 1123 ntBASIC16.42■□□□□ 0.22
NUBP1P53384 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.42■□□□□ 0.22
NUBP1P53384 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.42■□□□□ 0.22
NUBP1P53384 AC133539.2-201ENST00000604757 467 ntBASIC16.42■□□□□ 0.22
NUBP1P53384 Z93930.3-201ENST00000607919 749 ntBASIC16.42■□□□□ 0.22
NUBP1P53384 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NUBP1P53384 NRXN1-234ENST00000630656 837 ntTSL 5 BASIC16.42■□□□□ 0.22
NUBP1P53384 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
NUBP1P53384 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NUBP1P53384 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NUBP1P53384 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUBP1P53384 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.42■□□□□ 0.22
NUBP1P53384 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.42■□□□□ 0.22
NUBP1P53384 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.42■□□□□ 0.22
NUBP1P53384 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NUBP1P53384 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.42■□□□□ 0.22
NUBP1P53384 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NUBP1P53384 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUBP1P53384 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUBP1P53384 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.41■□□□□ 0.22
NUBP1P53384 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NUBP1P53384 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NUBP1P53384 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NUBP1P53384 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUBP1P53384 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUBP1P53384 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NUBP1P53384 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NUBP1P53384 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUBP1P53384 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC16.41■□□□□ 0.22
NUBP1P53384 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.41■□□□□ 0.22
NUBP1P53384 AC092810.1-201ENST00000429208 1224 ntBASIC16.41■□□□□ 0.22
NUBP1P53384 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms