Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HTR1EP28566 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
HTR1EP28566 AC006449.6-201ENST00000612330 2296 ntBASIC15.85■□□□□ 0.13
HTR1EP28566 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.85■□□□□ 0.13
HTR1EP28566 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.85■□□□□ 0.13
HTR1EP28566 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HTR1EP28566 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.85■□□□□ 0.13
HTR1EP28566 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.85■□□□□ 0.13
HTR1EP28566 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HTR1EP28566 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.85■□□□□ 0.13
HTR1EP28566 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1EP28566 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1EP28566 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1EP28566 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.85■□□□□ 0.13
HTR1EP28566 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1EP28566 AL020989.1-201ENST00000422979 469 ntBASIC15.85■□□□□ 0.13
HTR1EP28566 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.85■□□□□ 0.13
HTR1EP28566 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
HTR1EP28566 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.85■□□□□ 0.13
HTR1EP28566 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
HTR1EP28566 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
HTR1EP28566 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1EP28566 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.85■□□□□ 0.13
HTR1EP28566 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1EP28566 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.85■□□□□ 0.13
HTR1EP28566 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.85■□□□□ 0.13
HTR1EP28566 AC008735.5-201ENST00000623544 497 ntBASIC15.85■□□□□ 0.13
HTR1EP28566 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.85■□□□□ 0.13
HTR1EP28566 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1EP28566 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1EP28566 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1EP28566 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1EP28566 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1EP28566 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.85■□□□□ 0.13
HTR1EP28566 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.85■□□□□ 0.13
HTR1EP28566 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1EP28566 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1EP28566 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.85■□□□□ 0.13
HTR1EP28566 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
HTR1EP28566 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.84■□□□□ 0.13
HTR1EP28566 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1EP28566 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.84■□□□□ 0.13
HTR1EP28566 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1EP28566 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1EP28566 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1EP28566 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1EP28566 AC010491.1-201ENST00000563101 2797 ntBASIC15.84■□□□□ 0.13
HTR1EP28566 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1EP28566 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1EP28566 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1EP28566 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1EP28566 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1EP28566 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1EP28566 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
HTR1EP28566 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.84■□□□□ 0.13
HTR1EP28566 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.84■□□□□ 0.13
HTR1EP28566 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1EP28566 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.84■□□□□ 0.13
HTR1EP28566 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
HTR1EP28566 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1EP28566 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1EP28566 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1EP28566 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1EP28566 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1EP28566 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1EP28566 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1EP28566 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1EP28566 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.84■□□□□ 0.13
HTR1EP28566 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1EP28566 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HTR1EP28566 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
HTR1EP28566 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
HTR1EP28566 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.83■□□□□ 0.13
HTR1EP28566 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.83■□□□□ 0.13
HTR1EP28566 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HTR1EP28566 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.83■□□□□ 0.13
HTR1EP28566 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HTR1EP28566 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HTR1EP28566 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
HTR1EP28566 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.83■□□□□ 0.13
HTR1EP28566 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HTR1EP28566 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
HTR1EP28566 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.83■□□□□ 0.12
HTR1EP28566 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
HTR1EP28566 FER1L4-210ENST00000615531 5998 ntBASIC15.83■□□□□ 0.12
HTR1EP28566 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.83■□□□□ 0.12
HTR1EP28566 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HTR1EP28566 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HTR1EP28566 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
HTR1EP28566 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.83■□□□□ 0.12
HTR1EP28566 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HTR1EP28566 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HTR1EP28566 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.83■□□□□ 0.12
HTR1EP28566 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.83■□□□□ 0.12
HTR1EP28566 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HTR1EP28566 AC105339.3-201ENST00000560043 636 ntBASIC15.83■□□□□ 0.12
HTR1EP28566 AC002347.1-201ENST00000569543 541 ntBASIC15.83■□□□□ 0.12
HTR1EP28566 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.83■□□□□ 0.12
HTR1EP28566 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HTR1EP28566 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms