Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMPD1P17405 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SMPD1P17405 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
SMPD1P17405 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMPD1P17405 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMPD1P17405 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMPD1P17405 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.18■□□□□ 0.5
SMPD1P17405 MEP1AP4-201ENST00000423244 1087 ntBASIC18.18■□□□□ 0.5
SMPD1P17405 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.18■□□□□ 0.5
SMPD1P17405 HLA-V-201ENST00000429037 534 ntBASIC18.18■□□□□ 0.5
SMPD1P17405 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.18■□□□□ 0.5
SMPD1P17405 HIST3H2BA-201ENST00000436555 524 ntBASIC18.18■□□□□ 0.5
SMPD1P17405 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMPD1P17405 RN7SL837P-201ENST00000463010 287 ntBASIC18.18■□□□□ 0.5
SMPD1P17405 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.18■□□□□ 0.5
SMPD1P17405 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.18■□□□□ 0.5
SMPD1P17405 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.18■□□□□ 0.5
SMPD1P17405 AC123567.1-201ENST00000548294 1261 ntBASIC18.18■□□□□ 0.5
SMPD1P17405 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.18■□□□□ 0.5
SMPD1P17405 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.18■□□□□ 0.5
SMPD1P17405 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.18■□□□□ 0.5
SMPD1P17405 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.18■□□□□ 0.5
SMPD1P17405 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.18■□□□□ 0.5
SMPD1P17405 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.18■□□□□ 0.5
SMPD1P17405 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMPD1P17405 AC005915.1-201ENST00000624912 2018 ntBASIC18.18■□□□□ 0.5
SMPD1P17405 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMPD1P17405 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
SMPD1P17405 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMPD1P17405 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SMPD1P17405 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMPD1P17405 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMPD1P17405 AC106820.2-201ENST00000563775 3264 ntBASIC18.17■□□□□ 0.5
SMPD1P17405 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMPD1P17405 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMPD1P17405 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMPD1P17405 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SMPD1P17405 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMPD1P17405 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.17■□□□□ 0.5
SMPD1P17405 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMPD1P17405 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMPD1P17405 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMPD1P17405 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.17■□□□□ 0.5
SMPD1P17405 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SMPD1P17405 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.17■□□□□ 0.5
SMPD1P17405 AC112492.5-201ENST00000421897 457 ntBASIC18.17■□□□□ 0.5
SMPD1P17405 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.17■□□□□ 0.5
SMPD1P17405 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.17■□□□□ 0.5
SMPD1P17405 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.17■□□□□ 0.5
SMPD1P17405 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.17■□□□□ 0.5
SMPD1P17405 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.17■□□□□ 0.5
SMPD1P17405 AC092337.1-201ENST00000568699 1129 ntBASIC18.17■□□□□ 0.5
SMPD1P17405 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
SMPD1P17405 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.17■□□□□ 0.5
SMPD1P17405 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMPD1P17405 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.17■□□□□ 0.5
SMPD1P17405 AL645608.8-201ENST00000606034 2086 ntBASIC18.17■□□□□ 0.5
SMPD1P17405 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMPD1P17405 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SMPD1P17405 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SMPD1P17405 CYP4F24P-201ENST00000586049 1580 ntBASIC18.17■□□□□ 0.5
SMPD1P17405 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMPD1P17405 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMPD1P17405 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
SMPD1P17405 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMPD1P17405 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMPD1P17405 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.16■□□□□ 0.5
SMPD1P17405 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.16■□□□□ 0.5
SMPD1P17405 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMPD1P17405 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMPD1P17405 LINC01144-201ENST00000626198 1710 ntBASIC18.16■□□□□ 0.5
SMPD1P17405 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMPD1P17405 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMPD1P17405 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMPD1P17405 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMPD1P17405 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMPD1P17405 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.16■□□□□ 0.5
SMPD1P17405 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SMPD1P17405 ACA64.2-201ENST00000459014 129 ntBASIC18.16■□□□□ 0.5
SMPD1P17405 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.16■□□□□ 0.5
SMPD1P17405 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.16■□□□□ 0.5
SMPD1P17405 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.16■□□□□ 0.5
SMPD1P17405 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.16■□□□□ 0.5
SMPD1P17405 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SMPD1P17405 AC025048.3-201ENST00000590609 569 ntBASIC18.16■□□□□ 0.5
SMPD1P17405 MIR4321-201ENST00000592276 80 ntBASIC18.16■□□□□ 0.5
SMPD1P17405 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMPD1P17405 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMPD1P17405 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.16■□□□□ 0.5
SMPD1P17405 AC005702.4-201ENST00000618393 416 ntBASIC18.16■□□□□ 0.5
SMPD1P17405 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.16■□□□□ 0.5
SMPD1P17405 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SMPD1P17405 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMPD1P17405 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SMPD1P17405 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.16■□□□□ 0.5
SMPD1P17405 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMPD1P17405 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMPD1P17405 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.16■□□□□ 0.5
SMPD1P17405 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMPD1P17405 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms