Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 BX842568.4-201ENST00000421222 227 ntBASIC16.7■□□□□ 0.26
HLA-DQB2P05538 MKNK2P1-201ENST00000437526 628 ntBASIC16.7■□□□□ 0.26
HLA-DQB2P05538 PRYP6-201ENST00000514804 343 ntBASIC16.7■□□□□ 0.26
HLA-DQB2P05538 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 AL138918.1-201ENST00000568306 659 ntBASIC16.7■□□□□ 0.26
HLA-DQB2P05538 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 AC010327.4-202ENST00000591484 748 ntBASIC16.7■□□□□ 0.26
HLA-DQB2P05538 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 AKAP8P1-201ENST00000434743 1349 ntBASIC16.7■□□□□ 0.26
HLA-DQB2P05538 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.69■□□□□ 0.26
HLA-DQB2P05538 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 DNAJB3-201ENST00000446806 729 ntBASIC16.69■□□□□ 0.26
HLA-DQB2P05538 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 AL391005.1-201ENST00000623953 2435 ntBASIC16.69■□□□□ 0.26
HLA-DQB2P05538 AL596087.1-201ENST00000400979 1969 ntBASIC16.69■□□□□ 0.26
HLA-DQB2P05538 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB2P05538 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 AC018695.7-201ENST00000624587 2492 ntBASIC16.68■□□□□ 0.26
HLA-DQB2P05538 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 GPX1P2-201ENST00000429271 606 ntBASIC16.68■□□□□ 0.26
HLA-DQB2P05538 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 KRT8P48-201ENST00000515599 1220 ntBASIC16.68■□□□□ 0.26
HLA-DQB2P05538 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 AL592424.1-201ENST00000563624 1536 ntBASIC16.68■□□□□ 0.26
HLA-DQB2P05538 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 AC026691.1-201ENST00000602502 2017 ntBASIC16.68■□□□□ 0.26
HLA-DQB2P05538 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms