Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4B1Q9Y6B7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4B1Q9Y6B7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4B1Q9Y6B7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.94■□□□□ 0.14
AP4B1Q9Y6B7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4B1Q9Y6B7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.94■□□□□ 0.14
AP4B1Q9Y6B7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.94■□□□□ 0.14
AP4B1Q9Y6B7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4B1Q9Y6B7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
AP4B1Q9Y6B7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP4B1Q9Y6B7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP4B1Q9Y6B7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 SAPCD2P3-201ENST00000455031 850 ntBASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4B1Q9Y6B7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 AL009178.2-201ENST00000597278 2719 ntBASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 RBM17P3-201ENST00000417687 1192 ntBASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 ABCD1P5-201ENST00000445663 754 ntBASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP4B1Q9Y6B7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms