Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 AL139010.1-201ENST00000454878 894 ntBASIC19.13■□□□□ 0.65
CCDC17Q96LX7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 ZNF890P-202ENST00000530367 1156 ntBASIC19.13■□□□□ 0.65
CCDC17Q96LX7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 MIR4321-201ENST00000592276 80 ntBASIC19.13■□□□□ 0.65
CCDC17Q96LX7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC17Q96LX7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC17Q96LX7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC17Q96LX7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC17Q96LX7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC17Q96LX7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CCDC17Q96LX7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC17Q96LX7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC17Q96LX7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC17Q96LX7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC17Q96LX7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC17Q96LX7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC17Q96LX7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC17Q96LX7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC17Q96LX7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.12■□□□□ 0.65
CCDC17Q96LX7 AC009407.1-201ENST00000568958 598 ntBASIC19.12■□□□□ 0.65
CCDC17Q96LX7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC17Q96LX7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC17Q96LX7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC17Q96LX7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC17Q96LX7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC17Q96LX7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC17Q96LX7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 KRT8P12-202ENST00000472924 1397 ntBASIC19.11■□□□□ 0.65
CCDC17Q96LX7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 SERBP1P5-201ENST00000510079 1181 ntBASIC19.11■□□□□ 0.65
CCDC17Q96LX7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC17Q96LX7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC17Q96LX7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC17Q96LX7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC17Q96LX7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC17Q96LX7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC17Q96LX7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC17Q96LX7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC17Q96LX7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC17Q96LX7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC17Q96LX7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC17Q96LX7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC17Q96LX7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC17Q96LX7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC17Q96LX7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC17Q96LX7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC17Q96LX7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC17Q96LX7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CCDC17Q96LX7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC17Q96LX7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC17Q96LX7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC17Q96LX7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms