Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM47Q96LD4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.28■□□□□ 0.68
TRIM47Q96LD4 TP53TG3HP-202ENST00000569755 579 ntBASIC19.28■□□□□ 0.68
TRIM47Q96LD4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRIM47Q96LD4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM47Q96LD4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.28■□□□□ 0.68
TRIM47Q96LD4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM47Q96LD4 AL031055.1-201ENST00000606362 631 ntBASIC19.28■□□□□ 0.68
TRIM47Q96LD4 AC018529.1-201ENST00000613063 361 ntBASIC19.28■□□□□ 0.68
TRIM47Q96LD4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.28■□□□□ 0.68
TRIM47Q96LD4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.28■□□□□ 0.68
TRIM47Q96LD4 MIR6799-201ENST00000620297 69 ntBASIC19.28■□□□□ 0.68
TRIM47Q96LD4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM47Q96LD4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM47Q96LD4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM47Q96LD4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM47Q96LD4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM47Q96LD4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM47Q96LD4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM47Q96LD4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM47Q96LD4 AL353732.1-201ENST00000569618 1459 ntBASIC19.28■□□□□ 0.68
TRIM47Q96LD4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM47Q96LD4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM47Q96LD4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM47Q96LD4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM47Q96LD4 AC016027.1-202ENST00000607927 1699 ntBASIC19.27■□□□□ 0.68
TRIM47Q96LD4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM47Q96LD4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM47Q96LD4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM47Q96LD4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM47Q96LD4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM47Q96LD4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TRIM47Q96LD4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TRIM47Q96LD4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
TRIM47Q96LD4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM47Q96LD4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM47Q96LD4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM47Q96LD4 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.27■□□□□ 0.68
TRIM47Q96LD4 HILS1-202ENST00000545329 423 ntBASIC19.27■□□□□ 0.68
TRIM47Q96LD4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM47Q96LD4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM47Q96LD4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM47Q96LD4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM47Q96LD4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM47Q96LD4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM47Q96LD4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM47Q96LD4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM47Q96LD4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
TRIM47Q96LD4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM47Q96LD4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
TRIM47Q96LD4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
TRIM47Q96LD4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
TRIM47Q96LD4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
TRIM47Q96LD4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM47Q96LD4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM47Q96LD4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM47Q96LD4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 AC009477.1-201ENST00000452936 217 ntBASIC19.25■□□□□ 0.67
TRIM47Q96LD4 AC010336.2-201ENST00000564226 506 ntBASIC19.25■□□□□ 0.67
TRIM47Q96LD4 RARRES2P9-201ENST00000565168 469 ntBASIC19.25■□□□□ 0.67
TRIM47Q96LD4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms