Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 AC244669.2-201ENST00000612320 853 ntBASIC11.3□□□□□ -0.6
CSMD3Q7Z407 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 LINC02199-201ENST00000506655 2702 ntBASIC11.3□□□□□ -0.6
CSMD3Q7Z407 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 AL162726.2-201ENST00000438986 1017 ntBASIC11.3□□□□□ -0.6
CSMD3Q7Z407 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSMD3Q7Z407 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 Z97205.2-201ENST00000564697 1639 ntBASIC11.29□□□□□ -0.6
CSMD3Q7Z407 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 FOS-206ENST00000555347 1280 ntTSL 2 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 AC091271.1-201ENST00000611877 1162 ntBASIC11.29□□□□□ -0.6
CSMD3Q7Z407 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 TPO-206ENST00000382269 1155 ntTSL 5 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 PIGL-212ENST00000581006 554 ntTSL 4 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 LBH-202ENST00000401506 485 ntTSL 3 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 KRT43P-201ENST00000434019 910 ntBASIC11.29□□□□□ -0.6
CSMD3Q7Z407 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC11.29□□□□□ -0.6
CSMD3Q7Z407 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 FAM21FP-201ENST00000426241 1131 ntBASIC11.28□□□□□ -0.6
CSMD3Q7Z407 AC007551.1-201ENST00000457394 519 ntBASIC11.28□□□□□ -0.6
CSMD3Q7Z407 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms