Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 AL033527.5-202ENST00000641632 1098 ntBASIC19.62■□□□□ 0.73
PDS5AQ29RF7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 SPDYE22P-201ENST00000582158 798 ntBASIC19.61■□□□□ 0.73
PDS5AQ29RF7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.61■□□□□ 0.73
PDS5AQ29RF7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 PIN1P1-201ENST00000412108 996 ntBASIC19.6■□□□□ 0.73
PDS5AQ29RF7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 AC114501.2-201ENST00000439631 535 ntBASIC19.6■□□□□ 0.73
PDS5AQ29RF7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 CYP4F24P-201ENST00000586049 1580 ntBASIC19.6■□□□□ 0.73
PDS5AQ29RF7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDS5AQ29RF7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 AC009053.2-201ENST00000563701 2365 ntBASIC19.59■□□□□ 0.73
PDS5AQ29RF7 ME2P1-201ENST00000426028 1970 ntBASIC19.59■□□□□ 0.73
PDS5AQ29RF7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 AC015922.1-201ENST00000421102 1152 ntBASIC19.59■□□□□ 0.73
PDS5AQ29RF7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.59■□□□□ 0.73
PDS5AQ29RF7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms