Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MIR6805-201ENST00000615055 62 ntBASIC20.23■□□□□ 0.83
NUP98P52948 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NUP98P52948 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NUP98P52948 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NUP98P52948 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
NUP98P52948 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NUP98P52948 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NUP98P52948 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NUP98P52948 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NUP98P52948 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NUP98P52948 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NUP98P52948 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
NUP98P52948 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
NUP98P52948 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NUP98P52948 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NUP98P52948 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.22■□□□□ 0.83
NUP98P52948 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NUP98P52948 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC20.22■□□□□ 0.83
NUP98P52948 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC20.22■□□□□ 0.83
NUP98P52948 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.22■□□□□ 0.83
NUP98P52948 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC20.22■□□□□ 0.83
NUP98P52948 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NUP98P52948 AL162274.1-201ENST00000617191 1098 ntBASIC20.22■□□□□ 0.83
NUP98P52948 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NUP98P52948 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC20.22■□□□□ 0.83
NUP98P52948 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NUP98P52948 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NUP98P52948 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NUP98P52948 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NUP98P52948 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NUP98P52948 AMT-232ENST00000636199 1546 ntTSL 5 BASIC20.22■□□□□ 0.83
NUP98P52948 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUP98P52948 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUP98P52948 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NUP98P52948 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC20.21■□□□□ 0.83
NUP98P52948 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUP98P52948 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUP98P52948 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUP98P52948 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUP98P52948 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NUP98P52948 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUP98P52948 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NUP98P52948 ANKRD19P-201ENST00000338192 862 ntBASIC20.21■□□□□ 0.83
NUP98P52948 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUP98P52948 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUP98P52948 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NUP98P52948 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.21■□□□□ 0.83
NUP98P52948 RPS2P32-201ENST00000439199 892 ntBASIC20.21■□□□□ 0.83
NUP98P52948 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.21■□□□□ 0.83
NUP98P52948 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NUP98P52948 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.21■□□□□ 0.83
NUP98P52948 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC20.21■□□□□ 0.83
NUP98P52948 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NUP98P52948 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.21■□□□□ 0.83
NUP98P52948 BRI3BPP1-201ENST00000594224 787 ntBASIC20.21■□□□□ 0.83
NUP98P52948 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUP98P52948 AL691432.1-201ENST00000596308 1422 ntBASIC20.21■□□□□ 0.83
NUP98P52948 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NUP98P52948 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
NUP98P52948 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUP98P52948 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NUP98P52948 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUP98P52948 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUP98P52948 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUP98P52948 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.21■□□□□ 0.83
NUP98P52948 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC20.2■□□□□ 0.82
NUP98P52948 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.2■□□□□ 0.82
NUP98P52948 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.2■□□□□ 0.82
NUP98P52948 RAB43P1-201ENST00000561790 589 ntBASIC20.2■□□□□ 0.82
NUP98P52948 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC20.2■□□□□ 0.82
NUP98P52948 MIR8072-201ENST00000614241 80 ntBASIC20.2■□□□□ 0.82
NUP98P52948 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NUP98P52948 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NUP98P52948 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NUP98P52948 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NUP98P52948 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NUP98P52948 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUP98P52948 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NUP98P52948 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NUP98P52948 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NUP98P52948 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.2■□□□□ 0.82
NUP98P52948 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.2■□□□□ 0.82
NUP98P52948 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.2■□□□□ 0.82
NUP98P52948 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
NUP98P52948 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUP98P52948 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NUP98P52948 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUP98P52948 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
NUP98P52948 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NUP98P52948 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.2■□□□□ 0.82
NUP98P52948 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NUP98P52948 TOMM22P5-201ENST00000416399 439 ntBASIC20.2■□□□□ 0.82
NUP98P52948 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.2■□□□□ 0.82
NUP98P52948 RN7SL752P-201ENST00000463779 287 ntBASIC20.2■□□□□ 0.82
NUP98P52948 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC20.2■□□□□ 0.82
NUP98P52948 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC20.2■□□□□ 0.82
NUP98P52948 PAM16-204ENST00000571941 674 ntTSL 3 BASIC20.2■□□□□ 0.82
NUP98P52948 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC20.2■□□□□ 0.82
NUP98P52948 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NUP98P52948 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms