Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
BRCA2P51587 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.16■□□□□ 0.5
BRCA2P51587 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.15■□□□□ 0.5
BRCA2P51587 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.15■□□□□ 0.5
BRCA2P51587 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRCA2P51587 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRCA2P51587 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRCA2P51587 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRCA2P51587 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC18.15■□□□□ 0.5
BRCA2P51587 YBX1P6-201ENST00000442962 1002 ntBASIC18.15■□□□□ 0.5
BRCA2P51587 TMEM198B-204ENST00000484016 896 ntBASIC18.15■□□□□ 0.5
BRCA2P51587 RARRES2P5-201ENST00000564013 466 ntBASIC18.15■□□□□ 0.5
BRCA2P51587 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.15■□□□□ 0.5
BRCA2P51587 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.15■□□□□ 0.5
BRCA2P51587 AC005702.4-201ENST00000618393 416 ntBASIC18.15■□□□□ 0.5
BRCA2P51587 CU634019.7-201ENST00000624153 1185 ntBASIC18.15■□□□□ 0.5
BRCA2P51587 FP236241.2-201ENST00000624906 1185 ntBASIC18.15■□□□□ 0.5
BRCA2P51587 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.15■□□□□ 0.5
BRCA2P51587 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
BRCA2P51587 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
BRCA2P51587 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
BRCA2P51587 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRCA2P51587 AC092171.3-201ENST00000610122 2651 ntBASIC18.15■□□□□ 0.5
BRCA2P51587 AL627389.1-201ENST00000413508 1182 ntBASIC18.15■□□□□ 0.5
BRCA2P51587 CNN2P8-201ENST00000421872 913 ntBASIC18.15■□□□□ 0.5
BRCA2P51587 NUS1P3-201ENST00000423502 862 ntBASIC18.15■□□□□ 0.5
BRCA2P51587 RN7SL399P-201ENST00000471648 279 ntBASIC18.15■□□□□ 0.5
BRCA2P51587 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.15■□□□□ 0.5
BRCA2P51587 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC18.15■□□□□ 0.5
BRCA2P51587 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.15■□□□□ 0.5
BRCA2P51587 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC18.15■□□□□ 0.5
BRCA2P51587 AC244669.2-201ENST00000612320 853 ntBASIC18.15■□□□□ 0.5
BRCA2P51587 AL354751.1-201ENST00000412768 1863 ntBASIC18.15■□□□□ 0.5
BRCA2P51587 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRCA2P51587 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRCA2P51587 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRCA2P51587 GGT4P-201ENST00000623672 1708 ntBASIC18.15■□□□□ 0.5
BRCA2P51587 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
BRCA2P51587 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRCA2P51587 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRCA2P51587 MIR326-201ENST00000362220 95 ntBASIC18.14■□□□□ 0.5
BRCA2P51587 SLC25A24P2-201ENST00000415059 510 ntBASIC18.14■□□□□ 0.5
BRCA2P51587 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.14■□□□□ 0.5
BRCA2P51587 LINC01451-201ENST00000623792 534 ntBASIC18.14■□□□□ 0.5
BRCA2P51587 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.5
BRCA2P51587 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
BRCA2P51587 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
BRCA2P51587 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
BRCA2P51587 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
BRCA2P51587 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRCA2P51587 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.14■□□□□ 0.49
BRCA2P51587 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.14■□□□□ 0.49
BRCA2P51587 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRCA2P51587 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.14■□□□□ 0.49
BRCA2P51587 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.14■□□□□ 0.49
BRCA2P51587 KRT90P-201ENST00000549264 1064 ntBASIC18.14■□□□□ 0.49
BRCA2P51587 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRCA2P51587 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRCA2P51587 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
BRCA2P51587 AL607033.1-201ENST00000623900 1599 ntBASIC18.14■□□□□ 0.49
BRCA2P51587 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRCA2P51587 AL031731.1-201ENST00000642131 2094 ntBASIC18.14■□□□□ 0.49
BRCA2P51587 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRCA2P51587 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.14■□□□□ 0.49
BRCA2P51587 IGF1-203ENST00000392904 761 ntTSL 5 BASIC18.14■□□□□ 0.49
BRCA2P51587 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRCA2P51587 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.14■□□□□ 0.49
BRCA2P51587 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRCA2P51587 Z97205.2-201ENST00000564697 1639 ntBASIC18.14■□□□□ 0.49
BRCA2P51587 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRCA2P51587 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
BRCA2P51587 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
BRCA2P51587 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRCA2P51587 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRCA2P51587 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRCA2P51587 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRCA2P51587 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRCA2P51587 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRCA2P51587 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRCA2P51587 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRCA2P51587 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
BRCA2P51587 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.13■□□□□ 0.49
BRCA2P51587 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRCA2P51587 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRCA2P51587 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.13■□□□□ 0.49
BRCA2P51587 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRCA2P51587 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRCA2P51587 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRCA2P51587 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.13■□□□□ 0.49
BRCA2P51587 EIF4HP1-201ENST00000453115 687 ntBASIC18.13■□□□□ 0.49
BRCA2P51587 TDH-203ENST00000531764 1110 ntBASIC18.13■□□□□ 0.49
BRCA2P51587 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
BRCA2P51587 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC18.13■□□□□ 0.49
BRCA2P51587 AC133539.2-201ENST00000604757 467 ntBASIC18.13■□□□□ 0.49
BRCA2P51587 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
BRCA2P51587 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRCA2P51587 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRCA2P51587 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRCA2P51587 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRCA2P51587 LINC02199-201ENST00000506655 2702 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms