Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPA3P35244 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RPA3P35244 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPA3P35244 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.75■□□□□ 0.27
RPA3P35244 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPA3P35244 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RPA3P35244 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPA3P35244 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPA3P35244 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPA3P35244 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPA3P35244 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RPA3P35244 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPA3P35244 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPA3P35244 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPA3P35244 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RPA3P35244 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.75■□□□□ 0.27
RPA3P35244 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.75■□□□□ 0.27
RPA3P35244 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
RPA3P35244 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
RPA3P35244 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.75■□□□□ 0.27
RPA3P35244 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.75■□□□□ 0.27
RPA3P35244 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPA3P35244 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RPA3P35244 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPA3P35244 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.75■□□□□ 0.27
RPA3P35244 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPA3P35244 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPA3P35244 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPA3P35244 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.75■□□□□ 0.27
RPA3P35244 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPA3P35244 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPA3P35244 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPA3P35244 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.74■□□□□ 0.27
RPA3P35244 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPA3P35244 AC073347.1-201ENST00000421633 2643 ntBASIC16.74■□□□□ 0.27
RPA3P35244 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPA3P35244 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.74■□□□□ 0.27
RPA3P35244 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPA3P35244 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.74■□□□□ 0.27
RPA3P35244 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPA3P35244 NCF1C-201ENST00000438382 1427 ntBASIC16.74■□□□□ 0.27
RPA3P35244 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPA3P35244 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPA3P35244 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPA3P35244 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
RPA3P35244 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.74■□□□□ 0.27
RPA3P35244 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.74■□□□□ 0.27
RPA3P35244 AF186996.4-201ENST00000467186 377 ntBASIC16.74■□□□□ 0.27
RPA3P35244 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.74■□□□□ 0.27
RPA3P35244 AC021087.4-201ENST00000563761 564 ntBASIC16.74■□□□□ 0.27
RPA3P35244 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.74■□□□□ 0.27
RPA3P35244 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.74■□□□□ 0.27
RPA3P35244 TP73-AS1-207ENST00000624167 988 ntBASIC16.74■□□□□ 0.27
RPA3P35244 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPA3P35244 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.74■□□□□ 0.27
RPA3P35244 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.74■□□□□ 0.27
RPA3P35244 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPA3P35244 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPA3P35244 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPA3P35244 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
RPA3P35244 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.74■□□□□ 0.27
RPA3P35244 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPA3P35244 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPA3P35244 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
RPA3P35244 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.74■□□□□ 0.27
RPA3P35244 SNX33P1-201ENST00000592116 1762 ntBASIC16.74■□□□□ 0.27
RPA3P35244 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPA3P35244 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPA3P35244 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPA3P35244 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPA3P35244 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPA3P35244 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.73■□□□□ 0.27
RPA3P35244 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPA3P35244 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPA3P35244 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
RPA3P35244 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.73■□□□□ 0.27
RPA3P35244 AP005117.1-202ENST00000581724 1908 ntBASIC16.73■□□□□ 0.27
RPA3P35244 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RPA3P35244 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RPA3P35244 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPA3P35244 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.73■□□□□ 0.27
RPA3P35244 RNPS1P1-201ENST00000507437 918 ntBASIC16.73■□□□□ 0.27
RPA3P35244 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.73■□□□□ 0.27
RPA3P35244 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.73■□□□□ 0.27
RPA3P35244 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.73■□□□□ 0.27
RPA3P35244 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.73■□□□□ 0.27
RPA3P35244 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.73■□□□□ 0.27
RPA3P35244 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RPA3P35244 AC064862.7-201ENST00000604520 867 ntBASIC16.73■□□□□ 0.27
RPA3P35244 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RPA3P35244 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPA3P35244 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPA3P35244 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPA3P35244 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPA3P35244 AC002310.6-201ENST00000624451 1377 ntBASIC16.73■□□□□ 0.27
RPA3P35244 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.73■□□□□ 0.27
RPA3P35244 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPA3P35244 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPA3P35244 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPA3P35244 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms