Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.52□□□□□ -0.25
DEFA4P12838 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
DEFA4P12838 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
DEFA4P12838 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
DEFA4P12838 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
DEFA4P12838 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
DEFA4P12838 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
DEFA4P12838 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
DEFA4P12838 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DEFA4P12838 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
DEFA4P12838 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
DEFA4P12838 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
DEFA4P12838 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
DEFA4P12838 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DEFA4P12838 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.51□□□□□ -0.25
DEFA4P12838 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DEFA4P12838 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
DEFA4P12838 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.51□□□□□ -0.25
DEFA4P12838 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DEFA4P12838 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DEFA4P12838 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
DEFA4P12838 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.51□□□□□ -0.25
DEFA4P12838 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DEFA4P12838 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.51□□□□□ -0.25
DEFA4P12838 TUBB8P12-201ENST00000308911 1335 ntBASIC13.51□□□□□ -0.25
DEFA4P12838 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
DEFA4P12838 TUBB7P-202ENST00000428444 1305 ntBASIC13.51□□□□□ -0.25
DEFA4P12838 TUBB8P7-204ENST00000567960 1332 ntBASIC13.51□□□□□ -0.25
DEFA4P12838 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DEFA4P12838 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DEFA4P12838 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DEFA4P12838 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DEFA4P12838 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
DEFA4P12838 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
DEFA4P12838 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.51□□□□□ -0.25
DEFA4P12838 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.51□□□□□ -0.25
DEFA4P12838 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DEFA4P12838 AP002490.2-201ENST00000524791 560 ntBASIC13.51□□□□□ -0.25
DEFA4P12838 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.51□□□□□ -0.25
DEFA4P12838 AC091304.2-201ENST00000564639 760 ntBASIC13.51□□□□□ -0.25
DEFA4P12838 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
DEFA4P12838 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.51□□□□□ -0.25
DEFA4P12838 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.51□□□□□ -0.25
DEFA4P12838 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DEFA4P12838 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.51□□□□□ -0.25
DEFA4P12838 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DEFA4P12838 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
DEFA4P12838 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DEFA4P12838 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DEFA4P12838 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
DEFA4P12838 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.51□□□□□ -0.25
DEFA4P12838 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DEFA4P12838 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
DEFA4P12838 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.5□□□□□ -0.25
DEFA4P12838 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
DEFA4P12838 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.5□□□□□ -0.25
DEFA4P12838 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.5□□□□□ -0.25
DEFA4P12838 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
DEFA4P12838 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 AL021920.2-201ENST00000624828 1351 ntBASIC13.5□□□□□ -0.25
DEFA4P12838 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
DEFA4P12838 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.5□□□□□ -0.25
DEFA4P12838 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
DEFA4P12838 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 RBM17P3-201ENST00000417687 1192 ntBASIC13.5□□□□□ -0.25
DEFA4P12838 LINC00982-205ENST00000420957 435 ntBASIC13.5□□□□□ -0.25
DEFA4P12838 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.5□□□□□ -0.25
DEFA4P12838 BX005266.1-201ENST00000473402 457 ntBASIC13.5□□□□□ -0.25
DEFA4P12838 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.5□□□□□ -0.25
DEFA4P12838 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
DEFA4P12838 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.5□□□□□ -0.25
DEFA4P12838 AL732292.2-201ENST00000609649 430 ntBASIC13.5□□□□□ -0.25
DEFA4P12838 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
DEFA4P12838 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.5□□□□□ -0.25
DEFA4P12838 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.5□□□□□ -0.25
DEFA4P12838 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.5□□□□□ -0.25
DEFA4P12838 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
DEFA4P12838 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.5□□□□□ -0.25
DEFA4P12838 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.5□□□□□ -0.25
DEFA4P12838 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms