Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.75■□□□□ 0.75
SEMA3EO15041 AC009407.1-201ENST00000568958 598 ntBASIC19.75■□□□□ 0.75
SEMA3EO15041 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.75■□□□□ 0.75
SEMA3EO15041 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA3EO15041 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.75■□□□□ 0.75
SEMA3EO15041 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA3EO15041 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA3EO15041 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.75■□□□□ 0.75
SEMA3EO15041 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.75■□□□□ 0.75
SEMA3EO15041 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.75■□□□□ 0.75
SEMA3EO15041 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.75■□□□□ 0.75
SEMA3EO15041 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA3EO15041 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA3EO15041 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA3EO15041 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA3EO15041 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA3EO15041 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.75■□□□□ 0.75
SEMA3EO15041 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3EO15041 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.74■□□□□ 0.75
SEMA3EO15041 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3EO15041 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
SEMA3EO15041 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3EO15041 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3EO15041 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3EO15041 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
SEMA3EO15041 KRT8P12-202ENST00000472924 1397 ntBASIC19.74■□□□□ 0.75
SEMA3EO15041 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3EO15041 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3EO15041 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3EO15041 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3EO15041 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3EO15041 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3EO15041 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3EO15041 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.74■□□□□ 0.75
SEMA3EO15041 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.74■□□□□ 0.75
SEMA3EO15041 SERBP1P5-201ENST00000510079 1181 ntBASIC19.74■□□□□ 0.75
SEMA3EO15041 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.74■□□□□ 0.75
SEMA3EO15041 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.74■□□□□ 0.75
SEMA3EO15041 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.74■□□□□ 0.75
SEMA3EO15041 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3EO15041 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3EO15041 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.74■□□□□ 0.75
SEMA3EO15041 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3EO15041 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.74■□□□□ 0.75
SEMA3EO15041 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.74■□□□□ 0.75
SEMA3EO15041 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SEMA3EO15041 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3EO15041 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3EO15041 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SEMA3EO15041 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.73■□□□□ 0.75
SEMA3EO15041 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3EO15041 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3EO15041 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3EO15041 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SEMA3EO15041 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3EO15041 PCDHA12-202ENST00000613593 2588 ntBASIC19.73■□□□□ 0.75
SEMA3EO15041 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.73■□□□□ 0.75
SEMA3EO15041 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.73■□□□□ 0.75
SEMA3EO15041 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.73■□□□□ 0.75
SEMA3EO15041 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.73■□□□□ 0.75
SEMA3EO15041 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3EO15041 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3EO15041 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3EO15041 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.73■□□□□ 0.75
SEMA3EO15041 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.73■□□□□ 0.75
SEMA3EO15041 SERBP1P3-201ENST00000459980 809 ntBASIC19.73■□□□□ 0.75
SEMA3EO15041 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.73■□□□□ 0.75
SEMA3EO15041 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.73■□□□□ 0.75
SEMA3EO15041 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.73■□□□□ 0.75
SEMA3EO15041 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SEMA3EO15041 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.73■□□□□ 0.75
SEMA3EO15041 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3EO15041 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3EO15041 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SEMA3EO15041 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.73■□□□□ 0.75
SEMA3EO15041 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3EO15041 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.73■□□□□ 0.75
SEMA3EO15041 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3EO15041 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.73■□□□□ 0.75
SEMA3EO15041 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3EO15041 BTBD7P1-201ENST00000447253 1453 ntBASIC19.73■□□□□ 0.75
SEMA3EO15041 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.72■□□□□ 0.75
SEMA3EO15041 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3EO15041 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SEMA3EO15041 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3EO15041 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3EO15041 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.72■□□□□ 0.75
SEMA3EO15041 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3EO15041 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.72■□□□□ 0.75
SEMA3EO15041 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3EO15041 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3EO15041 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3EO15041 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3EO15041 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3EO15041 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3EO15041 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3EO15041 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3EO15041 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.72■□□□□ 0.75
SEMA3EO15041 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3EO15041 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms