Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 DOC2GP-204ENST00000639052 2548 ntBASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 AC023141.13-201ENST00000604991 943 ntBASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 AL513523.2-202ENST00000427283 2040 ntBASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 IGLL3P-201ENST00000412472 434 ntBASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 AC010740.1-201ENST00000417035 684 ntBASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 AL136370.1-201ENST00000608166 691 ntBASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 AC008267.7-201ENST00000624570 1194 ntBASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 AC010507.1-201ENST00000633895 436 ntBASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
VPS9D1Q9Y2B5 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 AC109635.5-201ENST00000533593 962 ntBASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VPS9D1Q9Y2B5 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms